| Chain sequence(s) |
A: QDKCKKVYENYPVSKCQLANQCNYDCKLDKHARSGECFYDEKRNLQCICDYCEY
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:46)
[INFO] Main: Simulation completed successfully. (00:01:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -2.6763 | |
| 2 | D | A | -3.2673 | |
| 3 | K | A | -3.1348 | |
| 4 | C | A | -2.4151 | |
| 5 | K | A | -2.3427 | |
| 6 | K | A | -1.8987 | |
| 7 | V | A | -0.1484 | |
| 8 | Y | A | -1.1946 | |
| 9 | E | A | -2.1312 | |
| 10 | N | A | -1.7375 | |
| 11 | Y | A | -0.6579 | |
| 12 | P | A | -0.3353 | |
| 13 | V | A | 0.7955 | |
| 14 | S | A | 0.0955 | |
| 15 | K | A | -0.5339 | |
| 16 | C | A | 0.0000 | |
| 17 | Q | A | -0.5943 | |
| 18 | L | A | 0.4952 | |
| 19 | A | A | -0.3951 | |
| 20 | N | A | -1.3170 | |
| 21 | Q | A | -0.7434 | |
| 22 | C | A | 0.0000 | |
| 23 | N | A | -1.0824 | |
| 24 | Y | A | -0.0270 | |
| 25 | D | A | 0.0000 | |
| 26 | C | A | 0.0000 | |
| 27 | K | A | -1.6107 | |
| 28 | L | A | -0.2081 | |
| 29 | D | A | -1.7233 | |
| 30 | K | A | -2.1136 | |
| 31 | H | A | -2.0546 | |
| 32 | A | A | 0.0000 | |
| 33 | R | A | -2.4067 | |
| 34 | S | A | -1.7545 | |
| 35 | G | A | 0.0000 | |
| 36 | E | A | -1.5035 | |
| 37 | C | A | 0.1081 | |
| 38 | F | A | 1.1049 | |
| 39 | Y | A | -0.0153 | |
| 40 | D | A | -1.9164 | |
| 41 | E | A | -3.1738 | |
| 42 | K | A | -3.7112 | |
| 43 | R | A | -3.3294 | |
| 44 | N | A | -2.1627 | |
| 45 | L | A | -0.3329 | |
| 46 | Q | A | -0.0768 | |
| 47 | C | A | 0.0000 | |
| 48 | I | A | -0.2965 | |
| 49 | C | A | 0.0000 | |
| 50 | D | A | -2.3893 | |
| 51 | Y | A | -1.8520 | |
| 52 | C | A | -1.3242 | |
| 53 | E | A | -1.3753 | |
| 54 | Y | A | 0.5193 |