Project name: GGGHKFG12

Status: done

Started: 2026-02-23 05:30:26
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Chain sequence(s) A: GGGHKFG
C: GGGHKFG
B: GGGHKFG
E: GGGHKFG
D: GGGHKFG
G: GGGHKFG
F: GGGHKFG
I: GGGHKFG
H: GGGHKFG
K: GGGHKFG
J: GGGHKFG
L: GGGHKFG
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:56)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:59)
Show buried residues

Minimal score value
-2.4592
Maximal score value
0.6122
Average score
-1.252
Total score value
-105.1719

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.2985
2 G A -1.6199
3 G A -2.1223
4 H A -2.3175
5 K A -2.0356
6 F A -0.1064
7 G A -0.4480
1 G B -1.3479
2 G B 0.0000
3 G B -2.1614
4 H B -1.7748
5 K B -1.7181
6 F B 0.4355
7 G B -0.2292
1 G C -1.3189
2 G C -1.7602
3 G C -2.0181
4 H C -1.6178
5 K C -1.6685
6 F C 0.6122
7 G C 0.1549
1 G D -1.3672
2 G D -1.7269
3 G D -2.0671
4 H D -1.8511
5 K D -1.6446
6 F D 0.5680
7 G D -0.1077
1 G E -1.3210
2 G E -1.8384
3 G E -2.1208
4 H E -1.9612
5 K E -1.9618
6 F E 0.4839
7 G E -0.3131
1 G F -1.3130
2 G F -1.8231
3 G F -1.9000
4 H F -1.8455
5 K F -1.8721
6 F F 0.5094
7 G F -0.4520
1 G G -1.3524
2 G G -1.9256
3 G G -2.4287
4 H G -2.3267
5 K G -1.9864
6 F G 0.3863
7 G G -0.2569
1 G H -1.3593
2 G H -1.9611
3 G H -2.3376
4 H H -2.4592
5 K H -2.0389
6 F H 0.4256
7 G H -0.1965
1 G I -1.3067
2 G I -1.9688
3 G I -2.3340
4 H I -2.3914
5 K I -2.1950
6 F I 0.2303
7 G I -0.1652
1 G J -1.3135
2 G J 0.0000
3 G J -2.1761
4 H J -2.3098
5 K J -1.9249
6 F J 0.4139
7 G J -0.2588
1 G K -1.2682
2 G K -1.8988
3 G K -2.1349
4 H K -1.8468
5 K K -1.8448
6 F K 0.5902
7 G K -0.1409
1 G L -1.3659
2 G L -1.7896
3 G L -2.1285
4 H L -2.1655
5 K L -1.8219
6 F L 0.5729
7 G L -0.1260
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Laboratory of Theory of Biopolymers 2018