| Chain sequence(s) |
B: SVEGKTFHTPQEVIDFVMKEAGLHRHEVEYLLFQNPELTYTEKAKYIVEQYKPA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:36)
[INFO] Main: Simulation completed successfully. (00:01:37)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -1.3508 | |
| 2 | V | B | -1.7523 | |
| 3 | E | B | -2.4680 | |
| 4 | G | B | -1.8136 | |
| 5 | K | B | -1.9431 | |
| 6 | T | B | -1.3279 | |
| 7 | F | B | 0.0000 | |
| 8 | H | B | -1.4583 | |
| 9 | T | B | -1.2367 | |
| 10 | P | B | -1.4506 | |
| 11 | Q | B | -2.3224 | |
| 12 | E | B | -2.3449 | |
| 13 | V | B | 0.0000 | |
| 14 | I | B | 0.0000 | |
| 15 | D | B | -2.7771 | |
| 16 | F | B | -1.7498 | |
| 17 | V | B | 0.0000 | |
| 18 | M | B | -2.3687 | |
| 19 | K | B | -2.6027 | |
| 20 | E | B | -1.9258 | |
| 21 | A | B | 0.0000 | |
| 22 | G | B | -1.6825 | |
| 23 | L | B | -1.9097 | |
| 24 | H | B | -2.7920 | |
| 25 | R | B | -3.5776 | |
| 26 | H | B | -2.6969 | |
| 27 | E | B | -2.6132 | |
| 28 | V | B | 0.0000 | |
| 29 | E | B | -1.0684 | |
| 30 | Y | B | 0.1380 | |
| 31 | L | B | 0.0000 | |
| 32 | L | B | 0.0000 | |
| 33 | F | B | 1.3655 | |
| 34 | Q | B | -0.3795 | |
| 35 | N | B | -0.6883 | |
| 36 | P | B | -1.0029 | |
| 37 | E | B | -1.9620 | |
| 38 | L | B | -0.9406 | |
| 39 | T | B | -0.8059 | |
| 40 | Y | B | -0.5294 | |
| 41 | T | B | -1.1728 | |
| 42 | E | B | -1.3567 | |
| 43 | K | B | -0.6729 | |
| 44 | A | B | 0.0000 | |
| 45 | K | B | -1.8425 | |
| 46 | Y | B | -0.9214 | |
| 47 | I | B | 0.0000 | |
| 48 | V | B | 0.0000 | |
| 49 | E | B | -2.6711 | |
| 50 | Q | B | -2.0574 | |
| 51 | Y | B | -1.0264 | |
| 52 | K | B | -2.0789 | |
| 53 | P | B | -1.1253 | |
| 54 | A | B | -0.6567 |