Project name: 3a06afb532f5bf9

Status: done

Started: 2025-02-28 16:13:34
Settings
Chain sequence(s) A: MATTVMASATASSPAFSAPGARARRAARLPAGFRGRVAAPPRRLALLARASQQADDAAADTSASAAPAARKLGLWDALAFSGPAPERINGRLAMVGFVSALAVEATRGDGILSQAGNGAGLAWFAYTAAVLSAASLVPLLQGESAEGRSGRFMTADAELWNGRLAMLGLVALAVTEYLTGAPFVNRKRRRRRPRPPPPPSFSSPHTPAAAAAPTARAKAAGPRLWDALAFGGPAPERTNGRLAMVGFVSALAVETDAGSGLACDSAEVRSGAVMSADAELWNGRFAMLGLVALAFTAHRRPAHQRLD
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:10)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:12)
Show buried residues

Minimal score value
-5.1564
Maximal score value
3.126
Average score
-0.2023
Total score value
-62.093

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.0674
2 A A 0.5188
3 T A 0.5053
4 T A 0.9907
5 V A 2.2877
6 M A 1.9477
7 A A 0.8896
8 S A 0.0540
9 A A -0.0584
10 T A -0.0997
11 A A -0.1119
12 S A -0.3599
13 S A -0.4141
14 P A 0.0098
15 A A 0.8154
16 F A 1.8287
17 S A 0.7055
18 A A 0.0887
19 P A -0.4818
20 G A -0.9018
21 A A -1.0882
22 R A -2.2662
23 A A -2.2091
24 R A -3.0808
25 R A -2.6700
26 A A -1.7210
27 A A -0.9561
28 R A -1.1145
29 L A 0.4956
30 P A 0.1365
31 A A 0.4207
32 G A 0.2251
33 F A 0.7530
34 R A -1.5988
35 G A -1.5255
36 R A -1.4394
37 V A 0.7055
38 A A 0.4783
39 A A 0.2516
40 P A -0.7312
41 P A -1.6384
42 R A -2.6305
43 R A -2.0575
44 L A 0.6279
45 A A 1.5897
46 L A 2.4377
47 L A 1.9507
48 A A 0.2265
49 R A -1.4793
50 A A -1.1882
51 S A -1.5379
52 Q A -2.2801
53 Q A -2.4754
54 A A -2.3417
55 D A -3.0867
56 D A -2.7650
57 A A -1.3037
58 A A -0.8761
59 A A -0.8646
60 D A -1.8142
61 T A -1.0361
62 S A -0.6469
63 A A -0.3309
64 S A -0.2337
65 A A -0.0585
66 A A -0.0505
67 P A -0.5138
68 A A -0.7169
69 A A -1.0862
70 R A -2.2517
71 K A -1.8754
72 L A 0.2411
73 G A 0.6447
74 L A 2.0704
75 W A 2.0848
76 D A 0.2656
77 A A 1.3845
78 L A 2.3287
79 A A 1.4421
80 F A 1.8644
81 S A 0.4480
82 G A -0.3531
83 P A -1.0198
84 A A -0.7913
85 P A -1.3245
86 E A -2.8064
87 R A -2.8296
88 I A -1.1023
89 N A -2.2046
90 G A -2.1589
91 R A -1.3645
92 L A 0.0918
93 A A 0.3293
94 M A 0.9616
95 V A 1.2007
96 G A 1.1731
97 F A 1.8143
98 V A 1.8936
99 S A 0.9187
100 A A 0.7424
101 L A 0.6417
102 A A 0.2283
103 V A -0.3856
104 E A -1.4751
105 A A -0.8748
106 T A -1.4850
107 R A -2.9031
108 G A -2.1807
109 D A -2.3274
110 G A -0.8522
111 I A 0.8137
112 L A -0.4905
113 S A -0.8956
114 Q A -0.9408
115 A A -0.4139
116 G A -0.7785
117 N A -1.7488
118 G A -0.8980
119 A A -0.1390
120 G A 0.1628
121 L A 0.7300
122 A A 1.0650
123 W A 2.0129
124 F A 1.9244
125 A A 1.8890
126 Y A 2.5574
127 T A 2.0587
128 A A 1.9373
129 A A 1.7335
130 V A 2.3813
131 L A 2.3623
132 S A 1.9034
133 A A 1.7177
134 A A 1.9304
135 S A 2.0907
136 L A 3.0380
137 V A 2.8055
138 P A 1.2173
139 L A 2.0466
140 L A 1.9728
141 Q A -0.3416
142 G A -1.0088
143 E A -2.4028
144 S A -2.1163
145 A A -1.9536
146 E A -2.8359
147 G A -2.5864
148 R A -3.0427
149 S A -1.9059
150 G A -1.5091
151 R A -1.2377
152 F A 1.4277
153 M A 1.2199
154 T A -0.0391
155 A A -0.3982
156 D A -1.5196
157 A A -1.2700
158 E A -2.3334
159 L A -0.6806
160 W A -0.2605
161 N A -1.3460
162 G A -1.5447
163 R A -0.9157
164 L A 0.6319
165 A A 0.6643
166 M A 1.2277
167 L A 1.8047
168 G A 1.6326
169 L A 2.3580
170 V A 3.1260
171 A A 2.2574
172 L A 2.4748
173 A A 2.2048
174 V A 2.5727
175 T A 1.7518
176 E A 1.4605
177 Y A 2.1125
178 L A 2.2259
179 T A 0.7833
180 G A 0.5154
181 A A 0.5364
182 P A 0.7108
183 F A 1.5345
184 V A 1.1939
185 N A -1.5552
186 R A -3.3180
187 K A -4.4142
188 R A -5.0641
189 R A -5.1564
190 R A -4.9521
191 R A -4.7470
192 R A -4.1604
193 P A -2.8916
194 R A -2.9112
195 P A -1.6565
196 P A -1.0975
197 P A -0.8802
198 P A -0.4175
199 P A -0.0750
200 S A 0.4298
201 F A 1.5564
202 S A 0.3764
203 S A -0.2192
204 P A -0.7055
205 H A -1.2668
206 T A -0.7179
207 P A -0.4829
208 A A -0.1455
209 A A 0.0754
210 A A 0.0745
211 A A 0.0659
212 A A -0.0241
213 P A -0.5331
214 T A -0.6503
215 A A -1.1555
216 R A -2.3152
217 A A -1.6278
218 K A -2.1983
219 A A -1.1287
220 A A -1.0034
221 G A -1.1715
222 P A -1.0231
223 R A -0.9845
224 L A 1.2533
225 W A 1.6396
226 D A 0.0892
227 A A 1.0117
228 L A 2.1278
229 A A 1.6222
230 F A 1.6770
231 G A 0.3353
232 G A -0.2664
233 P A -0.6655
234 A A -1.1780
235 P A -1.3778
236 E A -3.2679
237 R A -3.3756
238 T A -2.1093
239 N A -1.8548
240 G A -2.1783
241 R A -1.6164
242 L A 0.8346
243 A A 0.8106
244 M A 1.8155
245 V A 2.4314
246 G A 1.7491
247 F A 2.7383
248 V A 3.1084
249 S A 1.9534
250 A A 1.7975
251 L A 1.9989
252 A A 1.0079
253 V A 1.0155
254 E A -0.9458
255 T A -1.0232
256 D A -1.7367
257 A A -1.3195
258 G A -1.2360
259 S A -0.7343
260 G A 0.1620
261 L A 1.2075
262 A A 0.6013
263 C A 0.0460
264 D A -1.2727
265 S A -1.0850
266 A A -1.1406
267 E A -1.5195
268 V A -0.1257
269 R A -1.7002
270 S A -1.1566
271 G A -0.3366
272 A A 0.8478
273 V A 2.1522
274 M A 1.6206
275 S A 0.5292
276 A A -0.5124
277 D A -1.0023
278 A A -0.8263
279 E A -1.8575
280 L A 0.1430
281 W A 0.1773
282 N A -0.8702
283 G A -0.7804
284 R A -0.5139
285 F A 1.6054
286 A A 0.8989
287 M A 1.4534
288 L A 1.7895
289 G A 1.9458
290 L A 2.9993
291 V A 2.8585
292 A A 2.3056
293 L A 2.8353
294 A A 1.8258
295 F A 1.7540
296 T A 0.3278
297 A A -0.4524
298 H A -1.5558
299 R A -2.7874
300 R A -3.0456
301 P A -2.2031
302 A A -1.7686
303 H A -2.1192
304 Q A -2.5224
305 R A -2.3573
306 L A -0.6901
307 D A -1.6325
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Laboratory of Theory of Biopolymers 2018