| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAPAVTVVYYVITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAMYYYQEEYMYSSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:17)
[INFO] Main: Simulation completed successfully. (00:01:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.8067 | |
| 2 | S | A | 0.8264 | |
| 3 | S | A | 1.0422 | |
| 4 | V | A | 0.7691 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.2771 | |
| 7 | K | A | -2.3542 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.7681 | |
| 10 | V | A | 0.1437 | |
| 11 | V | A | 1.5433 | |
| 12 | A | A | 0.9010 | |
| 13 | A | A | 0.3282 | |
| 14 | T | A | -0.3297 | |
| 15 | P | A | -1.0374 | |
| 16 | T | A | -0.9535 | |
| 17 | S | A | -0.5225 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7706 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.7660 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -1.6808 | |
| 24 | A | A | -0.7641 | |
| 25 | P | A | 0.3015 | |
| 26 | A | A | 0.6108 | |
| 27 | V | A | 1.2418 | |
| 28 | T | A | 0.8732 | |
| 29 | V | A | 1.2270 | |
| 30 | V | A | 1.6132 | |
| 31 | Y | A | 0.6225 | |
| 32 | Y | A | 0.0000 | |
| 33 | V | A | 0.0000 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | Y | A | -0.2693 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.8423 | |
| 39 | T | A | -1.5390 | |
| 40 | G | A | -1.3693 | |
| 41 | G | A | -1.5452 | |
| 42 | N | A | -1.5674 | |
| 43 | S | A | -0.9056 | |
| 44 | P | A | -0.3475 | |
| 45 | V | A | 0.4166 | |
| 46 | Q | A | -0.8459 | |
| 47 | E | A | -1.5148 | |
| 48 | F | A | -0.4923 | |
| 49 | T | A | -0.0816 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.4572 | |
| 52 | G | A | -0.2382 | |
| 53 | S | A | -0.9105 | |
| 54 | K | A | -1.9457 | |
| 55 | S | A | -1.1781 | |
| 56 | T | A | -0.6469 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2471 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6564 | |
| 61 | G | A | -1.0260 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3888 | |
| 64 | P | A | -1.5907 | |
| 65 | G | A | -1.2994 | |
| 66 | V | A | -1.6144 | |
| 67 | D | A | -2.7610 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.9191 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.0633 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.7350 | |
| 74 | A | A | 0.0000 | |
| 75 | M | A | 1.9817 | |
| 76 | Y | A | 2.1552 | |
| 77 | Y | A | 1.6296 | |
| 78 | Y | A | 0.6920 | |
| 79 | Q | A | -1.5837 | |
| 80 | E | A | -2.3724 | |
| 81 | E | A | -1.6881 | |
| 82 | Y | A | 1.1086 | |
| 83 | M | A | 1.6323 | |
| 84 | Y | A | 2.2208 | |
| 85 | S | A | 0.0000 | |
| 86 | S | A | 0.2709 | |
| 87 | P | A | 0.1625 | |
| 88 | I | A | 0.0963 | |
| 89 | S | A | -0.4829 | |
| 90 | I | A | -0.5804 | |
| 91 | N | A | -1.8226 | |
| 92 | Y | A | -1.6066 | |
| 93 | R | A | -2.7445 | |
| 94 | T | A | -1.5487 |