Project name: query_structure

Status: done

Started: 2026-03-16 21:46:31
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Chain sequence(s) C: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFWITYEEKFYRGEAIVLTVPGSERSYDLTGLKPGTEYKVWIVGVKGGQGSWPLSAIFTTGGHH
input PDB
Selected Chain(s) C
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with C chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:12)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:12)
Show buried residues

Minimal score value
-3.405
Maximal score value
2.5326
Average score
-0.6027
Total score value
-56.6557

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M C 1.1110
2 L C 0.5080
3 P C 0.2012
4 A C 0.1282
5 P C 0.0000
6 K C -1.9776
7 N C -1.3932
8 L C 0.0386
9 V C 1.3027
10 V C 0.7335
11 S C -0.5521
12 R C -2.0424
13 V C -0.8205
14 T C -1.8298
15 E C -3.4050
16 D C -2.8744
17 S C -2.2275
18 A C 0.0000
19 R C -1.3994
20 L C 0.0000
21 S C -0.4455
22 W C 0.0000
23 T C -1.2750
24 A C 0.0000
25 P C -1.2695
26 D C -1.8936
27 A C -1.3350
28 A C -1.1917
29 F C 0.0000
30 D C -2.3752
31 S C -1.3319
32 F C 0.0000
33 W C 1.4591
34 I C 0.0000
35 T C 1.3573
36 Y C 0.1785
37 E C -0.5849
38 E C -1.3582
39 K C -0.6628
40 F C 1.1085
41 Y C 0.1196
42 R C -1.7464
43 G C -1.5327
44 E C -1.7770
45 A C -0.6304
46 I C 1.3116
47 V C 2.5326
48 L C 1.7577
49 T C 0.7824
50 V C 0.0000
51 P C -1.1465
52 G C -1.7552
53 S C -1.7690
54 E C -1.7437
55 R C -1.1407
56 S C -0.7725
57 Y C -0.9079
58 D C -1.9712
59 L C 0.0000
60 T C -1.5283
61 G C -1.5554
62 L C 0.0000
63 K C -3.1222
64 P C -2.9105
65 G C -2.1900
66 T C 0.0000
67 E C -0.8154
68 Y C 0.0000
69 K C -0.3404
70 V C 0.0000
71 W C 0.8357
72 I C 0.0000
73 V C 0.8204
74 G C 0.0000
75 V C 0.0000
76 K C -2.1336
77 G C -1.7964
78 G C -1.6738
79 Q C -1.4131
80 G C -0.3316
81 S C 0.0000
82 W C 1.3923
83 P C 0.4930
84 L C 0.0230
85 S C 0.2806
86 A C 1.1599
87 I C 1.4845
88 F C 0.0000
89 T C -0.5437
90 T C 0.0000
91 G C -1.8723
92 G C -2.2720
93 H C -1.9858
94 H C -2.1527
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Laboratory of Theory of Biopolymers 2018