| Chain sequence(s) |
C: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFWITYEEKFYRGEAIVLTVPGSERSYDLTGLKPGTEYKVWIVGVKGGQGSWPLSAIFTTGGHH
input PDB |
| Selected Chain(s) | C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:12)
[INFO] Main: Simulation completed successfully. (00:01:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | C | 1.1110 | |
| 2 | L | C | 0.5080 | |
| 3 | P | C | 0.2012 | |
| 4 | A | C | 0.1282 | |
| 5 | P | C | 0.0000 | |
| 6 | K | C | -1.9776 | |
| 7 | N | C | -1.3932 | |
| 8 | L | C | 0.0386 | |
| 9 | V | C | 1.3027 | |
| 10 | V | C | 0.7335 | |
| 11 | S | C | -0.5521 | |
| 12 | R | C | -2.0424 | |
| 13 | V | C | -0.8205 | |
| 14 | T | C | -1.8298 | |
| 15 | E | C | -3.4050 | |
| 16 | D | C | -2.8744 | |
| 17 | S | C | -2.2275 | |
| 18 | A | C | 0.0000 | |
| 19 | R | C | -1.3994 | |
| 20 | L | C | 0.0000 | |
| 21 | S | C | -0.4455 | |
| 22 | W | C | 0.0000 | |
| 23 | T | C | -1.2750 | |
| 24 | A | C | 0.0000 | |
| 25 | P | C | -1.2695 | |
| 26 | D | C | -1.8936 | |
| 27 | A | C | -1.3350 | |
| 28 | A | C | -1.1917 | |
| 29 | F | C | 0.0000 | |
| 30 | D | C | -2.3752 | |
| 31 | S | C | -1.3319 | |
| 32 | F | C | 0.0000 | |
| 33 | W | C | 1.4591 | |
| 34 | I | C | 0.0000 | |
| 35 | T | C | 1.3573 | |
| 36 | Y | C | 0.1785 | |
| 37 | E | C | -0.5849 | |
| 38 | E | C | -1.3582 | |
| 39 | K | C | -0.6628 | |
| 40 | F | C | 1.1085 | |
| 41 | Y | C | 0.1196 | |
| 42 | R | C | -1.7464 | |
| 43 | G | C | -1.5327 | |
| 44 | E | C | -1.7770 | |
| 45 | A | C | -0.6304 | |
| 46 | I | C | 1.3116 | |
| 47 | V | C | 2.5326 | |
| 48 | L | C | 1.7577 | |
| 49 | T | C | 0.7824 | |
| 50 | V | C | 0.0000 | |
| 51 | P | C | -1.1465 | |
| 52 | G | C | -1.7552 | |
| 53 | S | C | -1.7690 | |
| 54 | E | C | -1.7437 | |
| 55 | R | C | -1.1407 | |
| 56 | S | C | -0.7725 | |
| 57 | Y | C | -0.9079 | |
| 58 | D | C | -1.9712 | |
| 59 | L | C | 0.0000 | |
| 60 | T | C | -1.5283 | |
| 61 | G | C | -1.5554 | |
| 62 | L | C | 0.0000 | |
| 63 | K | C | -3.1222 | |
| 64 | P | C | -2.9105 | |
| 65 | G | C | -2.1900 | |
| 66 | T | C | 0.0000 | |
| 67 | E | C | -0.8154 | |
| 68 | Y | C | 0.0000 | |
| 69 | K | C | -0.3404 | |
| 70 | V | C | 0.0000 | |
| 71 | W | C | 0.8357 | |
| 72 | I | C | 0.0000 | |
| 73 | V | C | 0.8204 | |
| 74 | G | C | 0.0000 | |
| 75 | V | C | 0.0000 | |
| 76 | K | C | -2.1336 | |
| 77 | G | C | -1.7964 | |
| 78 | G | C | -1.6738 | |
| 79 | Q | C | -1.4131 | |
| 80 | G | C | -0.3316 | |
| 81 | S | C | 0.0000 | |
| 82 | W | C | 1.3923 | |
| 83 | P | C | 0.4930 | |
| 84 | L | C | 0.0230 | |
| 85 | S | C | 0.2806 | |
| 86 | A | C | 1.1599 | |
| 87 | I | C | 1.4845 | |
| 88 | F | C | 0.0000 | |
| 89 | T | C | -0.5437 | |
| 90 | T | C | 0.0000 | |
| 91 | G | C | -1.8723 | |
| 92 | G | C | -2.2720 | |
| 93 | H | C | -1.9858 | |
| 94 | H | C | -2.1527 |