Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASDFTFRSYEMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARLRDGFNKGFDYWGQGTLVTVSS
input PDB |
Selected Chain(s) | C |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | YQ109C,SA119C,VI116C,TN114C,QA112C,GE111C |
Energy difference between WT (input) and mutated protein (by FoldX) | 26.9624 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:24) [INFO] FoldX: Starting FoldX energy minimalization (00:00:54) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:27) [INFO] Main: Simulation completed successfully. (00:01:28) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | E | C | -2.1213 | |
2 | V | C | -1.1151 | |
3 | Q | C | -1.1067 | |
4 | L | C | 0.0000 | |
5 | V | C | 1.5210 | |
6 | E | C | 0.0000 | |
7 | S | C | -0.0817 | |
8 | G | C | -0.8287 | |
9 | G | C | -0.0524 | |
10 | G | C | 0.8289 | |
11 | L | C | 1.4296 | |
12 | V | C | -0.0543 | |
13 | Q | C | -1.2994 | |
14 | P | C | -1.4529 | |
15 | G | C | -1.4128 | |
16 | G | C | -0.9720 | |
17 | S | C | -1.2376 | |
18 | L | C | -0.9668 | |
19 | R | C | -2.1390 | |
20 | L | C | 0.0000 | |
21 | S | C | -0.4108 | |
22 | C | C | 0.0000 | |
23 | A | C | 0.0578 | |
24 | A | C | 0.0000 | |
25 | S | C | -0.1286 | |
26 | D | C | 0.0000 | |
27 | F | C | 1.5425 | |
28 | T | C | 0.2496 | |
29 | F | C | 0.0000 | |
30 | R | C | -2.0325 | |
31 | S | C | -0.8863 | |
32 | Y | C | -1.2160 | |
33 | E | C | -1.1450 | |
34 | M | C | 0.0000 | |
35 | S | C | 0.0000 | |
36 | W | C | 0.0000 | |
37 | V | C | 0.0000 | |
38 | R | C | 0.0000 | |
39 | Q | C | -0.3109 | |
40 | A | C | -0.9950 | |
41 | P | C | -1.2935 | |
42 | G | C | -1.4368 | |
43 | K | C | -2.1454 | |
44 | G | C | -1.0790 | |
45 | L | C | 0.3538 | |
46 | E | C | -0.4412 | |
47 | W | C | 0.3145 | |
48 | V | C | 0.0000 | |
49 | S | C | 0.0000 | |
50 | A | C | 0.0000 | |
51 | I | C | 0.0000 | |
52 | S | C | -0.5829 | |
53 | G | C | -1.2446 | |
54 | S | C | -1.2285 | |
55 | G | C | -1.0815 | |
56 | G | C | -0.7342 | |
57 | S | C | -0.3020 | |
58 | T | C | 0.1991 | |
59 | Y | C | 0.6078 | |
60 | Y | C | -0.3572 | |
61 | A | C | -1.1461 | |
62 | D | C | -2.3472 | |
63 | S | C | -1.7211 | |
64 | V | C | 0.0000 | |
65 | K | C | -2.3863 | |
66 | G | C | -1.6183 | |
67 | R | C | 0.0000 | |
68 | F | C | 0.0000 | |
69 | T | C | -0.6722 | |
70 | I | C | 0.0000 | |
71 | S | C | -0.5624 | |
72 | R | C | -1.3626 | |
73 | D | C | -1.9805 | |
74 | N | C | -2.1901 | |
75 | S | C | -1.7905 | |
76 | K | C | -2.3163 | |
77 | N | C | -1.6475 | |
78 | T | C | 0.0000 | |
79 | L | C | 0.0000 | |
80 | Y | C | -0.6448 | |
81 | L | C | 0.0000 | |
82 | Q | C | -1.2319 | |
83 | M | C | 0.0000 | |
84 | N | C | -1.3296 | |
85 | S | C | -1.2272 | |
86 | L | C | 0.0000 | |
87 | R | C | -2.4483 | |
88 | A | C | -1.8439 | |
89 | E | C | -2.3248 | |
90 | D | C | 0.0000 | |
91 | T | C | -0.4076 | |
92 | A | C | 0.0000 | |
93 | I | C | 1.1434 | |
94 | Y | C | 0.0000 | |
95 | Y | C | 0.9802 | |
96 | C | C | 0.0000 | |
97 | A | C | 0.0000 | |
98 | R | C | 0.0000 | |
99 | L | C | 0.0000 | |
100 | R | C | -3.3168 | |
101 | D | C | -3.3421 | |
102 | G | C | -2.0859 | |
103 | F | C | -1.2302 | |
104 | N | C | -2.4276 | |
105 | K | C | -3.1917 | |
106 | G | C | -1.9876 | |
107 | F | C | -1.2243 | |
108 | D | C | -1.5122 | |
109 | Q | C | -0.9441 | mutated: YQ109C |
110 | W | C | 0.5087 | |
111 | E | C | 0.0000 | mutated: GE111C |
112 | A | C | 0.5245 | mutated: QA112C |
113 | G | C | 0.7850 | |
114 | N | C | 0.7585 | mutated: TN114C |
115 | L | C | 1.6654 | |
116 | I | C | 0.0000 | mutated: VI116C |
117 | T | C | 0.3476 | |
118 | V | C | 0.0000 | |
119 | A | C | -0.6063 | mutated: SA119C |
120 | S | C | -0.9794 |