Chain sequence(s) |
A: KVFGRCELAAAMKRHRLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | GA4A |
Energy difference between WT (input) and mutated protein (by FoldX) | 0.278747 kcal/mol |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:21) [INFO] FoldX: Starting FoldX energy minimalization (00:00:22) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:44) [INFO] Main: Simulation completed successfully. (00:00:44) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | K | A | -1.4016 | |
2 | V | A | 0.2019 | |
3 | F | A | 0.0000 | |
4 | A | A | -0.5802 | mutated: GA4A |
5 | R | A | -1.0330 | |
6 | C | A | -0.8540 | |
7 | E | A | -0.7640 | |
8 | L | A | 0.0000 | |
9 | A | A | 0.0000 | |
10 | A | A | -1.1888 | |
11 | A | A | -1.4833 | |
12 | M | A | 0.0000 | |
13 | K | A | -2.3831 | |
14 | R | A | -2.8307 | |
15 | H | A | -2.5883 | |
16 | R | A | -3.2912 | |
17 | L | A | 0.0000 | |
18 | D | A | -2.4016 | |
19 | N | A | -2.3657 | |
20 | Y | A | -1.9710 | |
21 | R | A | -2.3153 | |
22 | G | A | -1.7552 | |
23 | Y | A | -1.1685 | |
24 | S | A | -1.2259 | |
25 | L | A | 0.0000 | |
26 | G | A | 0.0000 | |
27 | N | A | -1.0846 | |
28 | W | A | 0.0000 | |
29 | V | A | 0.0000 | |
30 | C | A | 0.0000 | |
31 | A | A | 0.0000 | |
32 | A | A | 0.0000 | |
33 | K | A | -1.2797 | |
34 | F | A | -0.7550 | |
35 | E | A | -0.7516 | |
36 | S | A | 0.0000 | |
37 | N | A | -1.3493 | |
38 | F | A | 0.0000 | |
39 | N | A | -1.0703 | |
40 | T | A | 0.0000 | |
41 | Q | A | -1.4445 | |
42 | A | A | -1.1659 | |
43 | T | A | -1.3769 | |
44 | N | A | -1.9868 | |
45 | R | A | -2.7855 | |
46 | N | A | -2.2448 | |
47 | T | A | -1.6406 | |
48 | D | A | -2.4489 | |
49 | G | A | -2.0777 | |
50 | S | A | 0.0000 | |
51 | T | A | 0.0000 | |
52 | D | A | -1.3468 | |
53 | Y | A | 0.0000 | |
54 | G | A | 0.0000 | |
55 | I | A | 0.0000 | |
56 | L | A | 0.0000 | |
57 | Q | A | -0.5930 | |
58 | I | A | 0.0000 | |
59 | N | A | -1.2725 | |
60 | S | A | 0.0000 | |
61 | R | A | -2.3010 | |
62 | W | A | -0.8180 | |
63 | W | A | 0.0000 | |
64 | C | A | 0.0000 | |
65 | N | A | -2.6265 | |
66 | D | A | -2.2124 | |
67 | G | A | -1.8056 | |
68 | R | A | -2.2397 | |
69 | T | A | -2.1708 | |
70 | P | A | -1.6546 | |
71 | G | A | -1.3347 | |
72 | S | A | -2.0796 | |
73 | R | A | -2.4795 | |
74 | N | A | -1.7465 | |
75 | L | A | -0.5200 | |
76 | C | A | -0.9716 | |
77 | N | A | -1.4744 | |
78 | I | A | -0.7933 | |
79 | P | A | -1.1415 | |
80 | C | A | 0.0000 | |
81 | S | A | -0.6200 | |
82 | A | A | -0.4660 | |
83 | L | A | 0.0000 | |
84 | L | A | -1.0421 | |
85 | S | A | -1.3483 | |
86 | S | A | -1.5957 | |
87 | D | A | -2.1200 | |
88 | I | A | 0.0000 | |
89 | T | A | -1.2003 | |
90 | A | A | -0.8682 | |
91 | S | A | 0.0000 | |
92 | V | A | 0.0000 | |
93 | N | A | -1.8992 | |
94 | C | A | 0.0000 | |
95 | A | A | 0.0000 | |
96 | K | A | -2.0152 | |
97 | K | A | -2.0226 | |
98 | I | A | 0.0000 | |
99 | V | A | 0.0000 | |
100 | S | A | -2.2257 | |
101 | D | A | -2.7480 | |
102 | G | A | -2.1484 | |
103 | N | A | -2.1397 | |
104 | G | A | -1.9062 | |
105 | M | A | 0.0000 | |
106 | N | A | -1.3381 | |
107 | A | A | -0.6605 | |
108 | W | A | 0.0000 | |
109 | V | A | 0.2155 | |
110 | A | A | -0.9891 | |
111 | W | A | 0.0000 | |
112 | R | A | -3.0429 | |
113 | N | A | -2.9614 | |
114 | R | A | -3.1432 | |
115 | C | A | 0.0000 | |
116 | K | A | -3.1461 | |
117 | G | A | -2.2479 | |
118 | T | A | -2.3872 | |
119 | D | A | -2.4593 | |
120 | V | A | 0.0000 | |
121 | Q | A | -2.0558 | |
122 | A | A | -1.5836 | |
123 | W | A | -1.0679 | |
124 | I | A | -1.0337 | |
125 | R | A | -2.2189 | |
126 | G | A | -1.4036 | |
127 | C | A | -1.1971 | |
128 | R | A | -1.4647 | |
129 | L | A | -0.0129 |