Project name: 3aa26346e33d0ab [mutate: RP5P, RE7P]

Status: done

Started: 2026-04-01 11:02:32
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Chain sequence(s) P: VLTRVRKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAGKKVLGAFSDGLALDNLKGTFATLSELCDKLVDPENFRLLGNVLVCVLAFGKEFTPPVQAAYQKVVAGVANALAKYVLTPVEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAGKKVLGAFSDGLALDNLKGTFATLSELCDKLVDPENFRLLGNVLVCVLAFGKEFTPPVQAAYQKVVAGVANALAKY
input PDB
Selected Chain(s) P
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues RE7P,RP5P
Energy difference between WT (input) and mutated protein (by FoldX) -2.90543 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with P chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:06:54)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:07:48)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:10:36)
[INFO]       Main:     Simulation completed successfully.                                          (00:10:39)
Show buried residues

Minimal score value
-2.1302
Maximal score value
1.9308
Average score
-0.3192
Total score value
-87.4675

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V P 1.7728
3 L P 0.4242
4 T P -0.0191
5 P P -0.0050 mutated: RP5P
6 V P 1.6788
7 E P -0.0450 mutated: RE7P
8 K P -0.7515
9 S P -0.3290
10 A P -0.0558
11 V P 0.0000
12 T P -0.0450
13 A P 0.0411
14 L P 0.0000
15 W P 0.0337
16 G P -0.7549
17 K P -1.7462
18 V P -0.3398
19 N P -1.1461
20 V P -0.0389
21 D P -1.4076
22 E P -2.0046
23 V P 0.0000
24 G P 0.0000
25 G P -0.3542
26 E P -0.6021
27 A P 0.0000
28 L P 0.0000
29 G P 0.0000
30 R P -1.1798
31 L P 0.0000
32 L P 0.0000
33 V P 0.6600
34 V P 1.9073
35 Y P 0.5521
36 P P -0.0533
37 W P 0.7954
38 T P 0.0000
39 Q P -0.5998
40 R P -1.7582
41 F P 0.4780
42 F P 0.2527
43 E P -1.7775
44 S P -0.4846
45 F P 0.2198
46 G P -0.7342
47 D P -1.8760
48 L P 0.0000
49 S P -0.2208
50 T P -0.1177
51 P P -0.5332
52 D P -1.8231
53 A P -0.3153
54 V P 0.0000
55 M P 0.4086
56 G P -0.3747
57 N P 0.0000
58 P P -0.4926
59 K P -1.3400
60 V P 0.0000
61 K P -1.1971
62 A P -0.3314
64 G P 0.0000
65 K P -1.6637
66 K P -1.7834
67 V P 0.6012
68 L P 0.0000
69 G P -0.3789
70 A P -0.2045
71 F P 0.0000
72 S P -0.3707
73 D P -1.7954
74 G P 0.0000
75 L P 0.1631
76 A P 0.0865
78 L P -0.1423
79 D P -1.9902
80 N P -1.6038
81 L P 0.0000
82 K P -1.7776
83 G P -0.7406
84 T P -0.1181
85 F P 0.0000
86 A P 0.0003
87 T P 0.0312
88 L P 0.5800
89 S P 0.0000
90 E P -1.4928
91 L P 0.2409
93 C P 0.0692
94 D P -2.0307
95 K P -1.7467
96 L P 1.2326
98 V P 0.0919
99 D P -1.7246
100 P P -0.6394
101 E P -1.4315
102 N P -0.3292
103 F P -0.0456
104 R P -1.7501
105 L P -0.1011
106 L P 0.2476
107 G P 0.0000
108 N P -1.0228
109 V P 0.0000
110 L P 0.0000
111 V P 0.0000
112 C P 0.7826
113 V P 0.4119
114 L P 0.0000
115 A P 0.0573
118 F P 1.1028
119 G P -0.5611
120 K P -1.9758
121 E P -1.3546
122 F P 0.0000
123 T P -0.0709
124 P P -0.3064
125 P P -0.2642
126 V P 0.0207
127 Q P -0.7182
128 A P -0.1815
129 A P 0.0000
130 Y P 0.0000
131 Q P -0.9137
132 K P -1.1537
133 V P 0.0000
134 V P 0.0000
135 A P 0.0104
136 G P -0.0453
137 V P 0.0000
138 A P 0.0000
139 N P -1.2730
140 A P 0.0000
141 L P 0.1724
142 A P 0.0538
144 K P -1.5406
145 Y P 0.5544
1 V P 1.7728
3 L P 0.3923
4 T P -0.0342
5 P P 0.0573 mutated: RP5P
6 V P 1.6823
7 E P -0.0145 mutated: RE7P
8 K P -0.5927
9 S P -0.2850
10 A P -0.0252
11 V P 0.0000
12 T P -0.0331
13 A P 0.0674
14 L P 0.1587
15 W P 0.0000
16 G P -0.7759
17 K P -1.7486
18 V P -0.3490
19 N P -1.1790
20 V P -0.2282
21 D P -2.0968
22 E P -2.1010
23 V P -0.1193
24 G P 0.0000
25 G P -0.4424
26 E P -1.0924
27 A P 0.0000
28 L P 0.1492
29 G P 0.0000
30 R P -1.1740
31 L P 0.0000
32 L P 0.0000
33 V P 0.6564
34 V P 1.9308
35 Y P 0.6850
36 P P -0.0822
37 W P 0.4877
38 T P 0.0000
39 Q P -0.6081
40 R P -1.7468
41 F P 0.5460
42 F P 0.2967
43 E P -1.7705
44 S P -0.4879
45 F P 0.2021
46 G P -0.7358
47 D P -1.8753
48 L P 0.0000
49 S P -0.2179
50 T P -0.1042
51 P P -0.5435
52 D P -1.8258
53 A P -0.3149
54 V P 0.0000
55 M P 0.3330
56 G P -0.3892
57 N P 0.0000
58 P P -0.5685
59 K P -1.7470
60 V P 0.0000
61 K P -1.2227
62 A P -0.2011
64 G P 0.0000
65 K P -1.3437
66 K P -1.6969
67 V P 0.5464
68 L P 0.0000
69 G P -0.1831
70 A P -0.0199
71 F P 0.0000
72 S P -0.3934
73 D P -1.7982
74 G P 0.0000
75 L P 0.0000
76 A P 0.0585
78 L P -0.1391
79 D P -1.9909
80 N P -1.6061
81 L P 0.0000
82 K P -1.7875
83 G P -0.7922
84 T P -0.1240
85 F P 0.0000
86 A P 0.0015
87 T P 0.0362
88 L P 0.6314
89 S P 0.0000
90 E P -1.1186
91 L P 0.5038
93 C P 0.0216
94 D P -2.0376
95 K P -1.7435
96 L P 1.2346
98 V P 0.0861
99 D P -1.5998
100 P P -0.6124
101 E P -1.5014
102 N P 0.0000
103 F P 0.1567
104 R P -0.7263
105 L P 0.1414
106 L P 0.2461
107 G P 0.0000
108 N P -0.9509
109 V P 0.0000
110 L P 0.0000
111 V P 0.0000
112 C P 0.7818
113 V P 0.4083
114 L P 0.0000
115 A P 0.0519
118 F P 0.6017
119 G P -0.6516
120 K P -2.1181
121 E P -2.1302
122 F P 0.0000
123 T P -0.0698
124 P P -0.3053
125 P P -0.2558
126 V P 0.0700
127 Q P -0.6818
128 A P -0.0943
129 A P 0.0000
130 Y P 0.0000
131 Q P -0.9259
132 K P -1.1158
133 V P 0.0000
134 V P 0.0000
135 A P 0.0141
136 G P 0.0000
137 V P 0.0000
138 A P 0.0000
139 N P -0.5010
140 A P 0.0000
141 L P 0.1983
142 A P 0.0506
144 K P -1.4829
145 Y P 0.8660
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Laboratory of Theory of Biopolymers 2018