| Chain sequence(s) |
A: ETICTL
C: ETICTL B: ETICTL E: ETICTL D: ETICTL G: ETICTL F: ETICTL I: ETICTL H: ETICTL J: ETICTL input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,J |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:11)
[INFO] Main: Simulation completed successfully. (00:00:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | C | -3.0348 | |
| 2 | T | C | -1.1755 | |
| 3 | I | C | 0.2098 | |
| 4 | C | C | 0.0000 | |
| 5 | T | C | 1.1505 | |
| 6 | L | C | 1.3385 | |
| 1 | E | A | -2.2931 | |
| 2 | T | A | -0.6609 | |
| 3 | I | A | 1.0112 | |
| 4 | C | A | 1.6306 | |
| 5 | T | A | 1.3972 | |
| 6 | L | A | 1.9114 | |
| 1 | E | B | -2.4729 | |
| 2 | T | B | -0.9004 | |
| 3 | I | B | 0.3589 | |
| 4 | C | B | 1.0736 | |
| 5 | T | B | 0.9446 | |
| 6 | L | B | 1.5921 | |
| 1 | E | D | -3.1101 | |
| 2 | T | D | -1.4481 | |
| 3 | I | D | -0.1024 | |
| 4 | C | D | 0.0000 | |
| 5 | T | D | 0.8538 | |
| 6 | L | D | 1.0801 | |
| 1 | E | E | -3.3850 | |
| 2 | T | E | -1.5844 | |
| 3 | I | E | -0.0079 | |
| 4 | C | E | 0.0000 | |
| 5 | T | E | 0.5163 | |
| 6 | L | E | 0.9695 | |
| 1 | E | F | -3.3662 | |
| 2 | T | F | -1.5601 | |
| 3 | I | F | 0.0012 | |
| 4 | C | F | 0.0000 | |
| 5 | T | F | 0.5496 | |
| 6 | L | F | 1.0246 | |
| 1 | E | G | -2.9572 | |
| 2 | T | G | -1.0270 | |
| 3 | I | G | 0.1629 | |
| 4 | C | G | 0.0000 | |
| 5 | T | G | 0.8460 | |
| 6 | L | G | 0.9246 | |
| 1 | E | I | -2.2130 | |
| 2 | T | I | -0.1649 | |
| 3 | I | I | 1.3099 | |
| 4 | C | I | 0.0000 | |
| 5 | T | I | 0.8847 | |
| 6 | L | I | 1.2602 | |
| 1 | E | H | -2.9193 | |
| 2 | T | H | -0.8787 | |
| 3 | I | H | 0.3402 | |
| 4 | C | H | 0.0000 | |
| 5 | T | H | 1.1440 | |
| 6 | L | H | 1.4348 | |
| 1 | E | J | -2.1335 | |
| 2 | T | J | -0.1786 | |
| 3 | I | J | 1.5367 | |
| 4 | C | J | 1.5333 | |
| 5 | T | J | 1.3761 | |
| 6 | L | J | 1.9473 |