Project name: 19.21G12

Status: done

Started: 2026-07-07 08:35:33
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Chain sequence(s) H: EFQLQQSGPELVKPGASVKISCKASGYSFLDYNLNWVKQSNGKSLEWIGGINPKFGTTTYSQTFRGKATLTVDRSSTTAYMQLNGLTSEDSTVFYCAVLDYFDYWGQGTTLTVSS
L: DIVMTQSPATLSVTPGDRVSLSCRASQSISDYLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGSDFTLSINSVEPEDVGVYYCQNGHSFPLTFGAGTKLELK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:08)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:09)
Show buried residues

Minimal score value
-2.8765
Maximal score value
1.3259
Average score
-0.5858
Total score value
-130.0436

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.6398
2 F H -0.4600
3 Q H -1.2215
4 L H 0.0000
5 Q H -1.9033
6 Q H 0.0000
7 S H -1.0732
8 G H -0.9035
9 P H -0.4866
11 E H -0.3796
12 L H 0.7699
13 V H -0.2262
14 K H -1.6383
15 P H -1.5696
16 G H -1.2154
17 A H -0.9752
18 S H -1.0567
19 V H 0.0000
20 K H -1.3004
21 I H 0.0000
22 S H -0.6268
23 C H 0.0000
24 K H -1.4004
25 A H 0.0000
26 S H -0.9461
27 G H -0.8532
28 Y H -0.5148
29 S H -0.4679
30 F H 0.0000
35 L H -1.2406
36 D H -1.7273
37 Y H -1.1829
38 N H -1.4138
39 L H 0.0000
40 N H 0.0000
41 W H 0.0000
42 V H 0.0000
43 K H 0.0000
44 Q H -1.0161
45 S H -1.7000
46 N H -2.0265
47 G H -1.8527
48 K H -2.4339
49 S H -1.2307
50 L H 0.0000
51 E H -0.6948
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 G H -0.2854
56 I H 0.0000
57 N H -0.5606
58 P H 0.0000
59 K H -0.9380
62 F H 1.1037
63 G H -0.0231
64 T H 0.0503
65 T H -0.0101
66 T H -0.1238
67 Y H -0.4374
68 S H 0.0000
69 Q H -1.7855
70 T H -1.2039
71 F H -1.3369
72 R H -2.4254
74 G H -1.7052
75 K H -1.4368
76 A H 0.0000
77 T H -0.7427
78 L H 0.0000
79 T H -0.3310
80 V H -0.4611
81 D H -1.4264
82 R H -2.2997
83 S H -1.2426
84 S H -1.0122
85 T H -1.0787
86 T H 0.0000
87 A H 0.0000
88 Y H -0.1698
89 M H 0.0000
90 Q H -0.8954
91 L H 0.0000
92 N H -1.0954
93 G H -1.1873
94 L H 0.0000
95 T H -1.3335
96 S H -1.4424
97 E H -1.9672
98 D H 0.0000
99 S H -0.7501
100 T H 0.0000
101 V H -0.1973
102 F H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 V H 0.0000
107 L H -0.3644
108 D H -1.1469
114 Y H 0.1390
115 F H 0.0000
116 D H -0.2407
117 Y H -0.0200
118 W H -0.3505
119 G H 0.0000
120 Q H -1.7588
121 G H -1.0145
122 T H 0.0000
123 T H -0.3442
124 L H 0.0000
125 T H -0.1990
126 V H 0.0000
127 S H -0.5263
128 S H -0.6504
1 D L -1.2843
2 I L 0.0000
3 V L 0.8059
4 M L 0.0000
5 T L -0.5114
6 Q L 0.0000
7 S L -0.6479
8 P L -0.3407
9 A L -0.2470
10 T L -0.4617
11 L L -0.3158
12 S L -0.6254
13 V L 0.0000
14 T L -1.3304
15 P L -1.4894
16 G L -1.7054
17 D L -2.1475
18 R L -2.8765
19 V L 0.0000
20 S L -0.8263
21 L L 0.0000
22 S L -0.8993
23 C L 0.0000
24 R L -2.3306
25 A L 0.0000
26 S L -0.8769
27 Q L -1.3775
28 S L -1.2975
29 I L 0.0000
36 S L -0.8373
37 D L -0.9346
38 Y L -0.0222
39 L L 0.0000
40 H L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L -0.7113
45 K L -0.9963
46 S L -0.9177
47 H L -1.6969
48 E L -1.7067
49 S L -1.0701
50 P L 0.0000
51 R L -0.6932
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 K L -0.5115
56 Y L -0.1379
57 A L 0.0000
65 S L -0.7966
66 Q L -1.1923
67 S L -0.8324
68 I L 0.0000
69 S L -0.5972
70 G L -0.5246
71 I L -0.2774
72 P L -0.3068
74 S L -0.6062
75 R L -1.1004
76 F L 0.0000
77 S L -0.7255
78 G L -0.5371
79 S L -0.7608
80 G L -1.0698
83 S L -1.1434
84 G L -1.2541
85 S L -1.8379
86 D L -2.3038
87 F L 0.0000
88 T L -0.8029
89 L L 0.0000
90 S L 0.0000
91 I L 0.0000
92 N L -2.2939
93 S L -1.9392
94 V L 0.0000
95 E L -1.6147
96 P L -1.0841
97 E L -1.0782
98 D L 0.0000
99 V L -0.0715
100 G L -0.4044
101 V L -0.1188
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 N L 0.0000
107 G L 0.0072
108 H L -0.1973
109 S L 0.3707
114 F L 1.3259
115 P L 0.3738
116 L L 0.0000
117 T L 0.1995
118 F L 0.0000
119 G L 0.0000
120 A L -0.2261
121 G L 0.0000
122 T L 0.0000
123 K L -0.9419
124 L L 0.0000
125 E L -0.6403
126 L L -0.5957
127 K L -1.5886
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Laboratory of Theory of Biopolymers 2018