| Chain sequence(s) |
H: EFQLQQSGPELVKPGASVKISCKASGYSFLDYNLNWVKQSNGKSLEWIGGINPKFGTTTYSQTFRGKATLTVDRSSTTAYMQLNGLTSEDSTVFYCAVLDYFDYWGQGTTLTVSS
L: DIVMTQSPATLSVTPGDRVSLSCRASQSISDYLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGSDFTLSINSVEPEDVGVYYCQNGHSFPLTFGAGTKLELK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:08)
[INFO] Main: Simulation completed successfully. (00:01:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.6398 | |
| 2 | F | H | -0.4600 | |
| 3 | Q | H | -1.2215 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.9033 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -1.0732 | |
| 8 | G | H | -0.9035 | |
| 9 | P | H | -0.4866 | |
| 11 | E | H | -0.3796 | |
| 12 | L | H | 0.7699 | |
| 13 | V | H | -0.2262 | |
| 14 | K | H | -1.6383 | |
| 15 | P | H | -1.5696 | |
| 16 | G | H | -1.2154 | |
| 17 | A | H | -0.9752 | |
| 18 | S | H | -1.0567 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -1.3004 | |
| 21 | I | H | 0.0000 | |
| 22 | S | H | -0.6268 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.4004 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.9461 | |
| 27 | G | H | -0.8532 | |
| 28 | Y | H | -0.5148 | |
| 29 | S | H | -0.4679 | |
| 30 | F | H | 0.0000 | |
| 35 | L | H | -1.2406 | |
| 36 | D | H | -1.7273 | |
| 37 | Y | H | -1.1829 | |
| 38 | N | H | -1.4138 | |
| 39 | L | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | 0.0000 | |
| 44 | Q | H | -1.0161 | |
| 45 | S | H | -1.7000 | |
| 46 | N | H | -2.0265 | |
| 47 | G | H | -1.8527 | |
| 48 | K | H | -2.4339 | |
| 49 | S | H | -1.2307 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.6948 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | G | H | -0.2854 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | -0.5606 | |
| 58 | P | H | 0.0000 | |
| 59 | K | H | -0.9380 | |
| 62 | F | H | 1.1037 | |
| 63 | G | H | -0.0231 | |
| 64 | T | H | 0.0503 | |
| 65 | T | H | -0.0101 | |
| 66 | T | H | -0.1238 | |
| 67 | Y | H | -0.4374 | |
| 68 | S | H | 0.0000 | |
| 69 | Q | H | -1.7855 | |
| 70 | T | H | -1.2039 | |
| 71 | F | H | -1.3369 | |
| 72 | R | H | -2.4254 | |
| 74 | G | H | -1.7052 | |
| 75 | K | H | -1.4368 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.7427 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.3310 | |
| 80 | V | H | -0.4611 | |
| 81 | D | H | -1.4264 | |
| 82 | R | H | -2.2997 | |
| 83 | S | H | -1.2426 | |
| 84 | S | H | -1.0122 | |
| 85 | T | H | -1.0787 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.1698 | |
| 89 | M | H | 0.0000 | |
| 90 | Q | H | -0.8954 | |
| 91 | L | H | 0.0000 | |
| 92 | N | H | -1.0954 | |
| 93 | G | H | -1.1873 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -1.3335 | |
| 96 | S | H | -1.4424 | |
| 97 | E | H | -1.9672 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.7501 | |
| 100 | T | H | 0.0000 | |
| 101 | V | H | -0.1973 | |
| 102 | F | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | V | H | 0.0000 | |
| 107 | L | H | -0.3644 | |
| 108 | D | H | -1.1469 | |
| 114 | Y | H | 0.1390 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.2407 | |
| 117 | Y | H | -0.0200 | |
| 118 | W | H | -0.3505 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.7588 | |
| 121 | G | H | -1.0145 | |
| 122 | T | H | 0.0000 | |
| 123 | T | H | -0.3442 | |
| 124 | L | H | 0.0000 | |
| 125 | T | H | -0.1990 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5263 | |
| 128 | S | H | -0.6504 | |
| 1 | D | L | -1.2843 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.8059 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.5114 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.6479 | |
| 8 | P | L | -0.3407 | |
| 9 | A | L | -0.2470 | |
| 10 | T | L | -0.4617 | |
| 11 | L | L | -0.3158 | |
| 12 | S | L | -0.6254 | |
| 13 | V | L | 0.0000 | |
| 14 | T | L | -1.3304 | |
| 15 | P | L | -1.4894 | |
| 16 | G | L | -1.7054 | |
| 17 | D | L | -2.1475 | |
| 18 | R | L | -2.8765 | |
| 19 | V | L | 0.0000 | |
| 20 | S | L | -0.8263 | |
| 21 | L | L | 0.0000 | |
| 22 | S | L | -0.8993 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.3306 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.8769 | |
| 27 | Q | L | -1.3775 | |
| 28 | S | L | -1.2975 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -0.8373 | |
| 37 | D | L | -0.9346 | |
| 38 | Y | L | -0.0222 | |
| 39 | L | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.7113 | |
| 45 | K | L | -0.9963 | |
| 46 | S | L | -0.9177 | |
| 47 | H | L | -1.6969 | |
| 48 | E | L | -1.7067 | |
| 49 | S | L | -1.0701 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -0.6932 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | K | L | -0.5115 | |
| 56 | Y | L | -0.1379 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.7966 | |
| 66 | Q | L | -1.1923 | |
| 67 | S | L | -0.8324 | |
| 68 | I | L | 0.0000 | |
| 69 | S | L | -0.5972 | |
| 70 | G | L | -0.5246 | |
| 71 | I | L | -0.2774 | |
| 72 | P | L | -0.3068 | |
| 74 | S | L | -0.6062 | |
| 75 | R | L | -1.1004 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.7255 | |
| 78 | G | L | -0.5371 | |
| 79 | S | L | -0.7608 | |
| 80 | G | L | -1.0698 | |
| 83 | S | L | -1.1434 | |
| 84 | G | L | -1.2541 | |
| 85 | S | L | -1.8379 | |
| 86 | D | L | -2.3038 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.8029 | |
| 89 | L | L | 0.0000 | |
| 90 | S | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | N | L | -2.2939 | |
| 93 | S | L | -1.9392 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -1.6147 | |
| 96 | P | L | -1.0841 | |
| 97 | E | L | -1.0782 | |
| 98 | D | L | 0.0000 | |
| 99 | V | L | -0.0715 | |
| 100 | G | L | -0.4044 | |
| 101 | V | L | -0.1188 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | N | L | 0.0000 | |
| 107 | G | L | 0.0072 | |
| 108 | H | L | -0.1973 | |
| 109 | S | L | 0.3707 | |
| 114 | F | L | 1.3259 | |
| 115 | P | L | 0.3738 | |
| 116 | L | L | 0.0000 | |
| 117 | T | L | 0.1995 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | A | L | -0.2261 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.9419 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.6403 | |
| 126 | L | L | -0.5957 | |
| 127 | K | L | -1.5886 |