| Chain sequence(s) |
A: LPAPKNLVVSRVTEDSARLSWDIDEQRDWFDSFLIQYQESEKVGEAIVLTVPGSERSYDLTGLKPGTEYTVSIYGVYHVYRSSNPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:58)
[INFO] Main: Simulation completed successfully. (00:00:59)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.5748 | |
| 2 | P | A | -0.5185 | |
| 3 | A | A | -0.9516 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -2.4153 | |
| 6 | N | A | -2.0183 | |
| 7 | L | A | -0.6166 | |
| 8 | V | A | 0.5024 | |
| 9 | V | A | 0.4374 | |
| 10 | S | A | -0.6931 | |
| 11 | R | A | -1.9487 | |
| 12 | V | A | -0.9222 | |
| 13 | T | A | -1.7087 | |
| 14 | E | A | -2.9296 | |
| 15 | D | A | -2.5297 | |
| 16 | S | A | -1.9033 | |
| 17 | A | A | 0.0000 | |
| 18 | R | A | -1.1660 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.7615 | |
| 21 | W | A | 0.0000 | |
| 22 | D | A | -2.6853 | |
| 23 | I | A | -3.0562 | |
| 24 | D | A | -3.7996 | |
| 25 | E | A | -4.1076 | |
| 26 | Q | A | -3.5958 | |
| 27 | R | A | -3.9736 | |
| 28 | D | A | -3.7292 | |
| 29 | W | A | -1.9581 | |
| 30 | F | A | 0.0000 | |
| 31 | D | A | -1.9457 | |
| 32 | S | A | -1.0647 | |
| 33 | F | A | 0.0000 | |
| 34 | L | A | 0.7965 | |
| 35 | I | A | 0.0000 | |
| 36 | Q | A | 0.6350 | |
| 37 | Y | A | 0.4721 | |
| 38 | Q | A | -0.6437 | |
| 39 | E | A | -1.5914 | |
| 40 | S | A | -1.3198 | |
| 41 | E | A | -2.4117 | |
| 42 | K | A | -1.7401 | |
| 43 | V | A | 0.0791 | |
| 44 | G | A | -0.8979 | |
| 45 | E | A | -1.7166 | |
| 46 | A | A | -0.2258 | |
| 47 | I | A | 0.9885 | |
| 48 | V | A | 1.9081 | |
| 49 | L | A | 1.3260 | |
| 50 | T | A | 0.5271 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -1.1041 | |
| 53 | G | A | 0.0000 | |
| 54 | S | A | -1.5987 | |
| 55 | E | A | -1.7249 | |
| 56 | R | A | -1.3031 | |
| 57 | S | A | -0.8556 | |
| 58 | Y | A | -0.6367 | |
| 59 | D | A | -1.3536 | |
| 60 | L | A | 0.0000 | |
| 61 | T | A | -1.3097 | |
| 62 | G | A | -1.4330 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.8797 | |
| 65 | P | A | -2.4130 | |
| 66 | G | A | -1.7267 | |
| 67 | T | A | -2.0115 | |
| 68 | E | A | -1.5052 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | 0.1392 | |
| 71 | V | A | 0.0000 | |
| 72 | S | A | 0.2911 | |
| 73 | I | A | 0.0000 | |
| 74 | Y | A | -0.0182 | |
| 75 | G | A | 0.0000 | |
| 76 | V | A | 0.0199 | |
| 77 | Y | A | -0.2329 | |
| 78 | H | A | -0.2082 | |
| 79 | V | A | 1.5384 | |
| 80 | Y | A | 1.3157 | |
| 81 | R | A | -0.2350 | |
| 82 | S | A | -0.2217 | |
| 83 | S | A | 0.0000 | |
| 84 | N | A | -1.0926 | |
| 85 | P | A | -0.7637 | |
| 86 | L | A | -0.6093 | |
| 87 | S | A | 0.0395 | |
| 88 | A | A | 1.0729 | |
| 89 | I | A | 1.8379 | |
| 90 | F | A | 0.0000 | |
| 91 | T | A | -0.6387 | |
| 92 | T | A | -1.7646 |