| Chain sequence(s) |
L: LNPNAKVWQEI
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:11)
[INFO] Main: Simulation completed successfully. (00:00:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 80 | L | L | 1.3131 | |
| 81 | N | L | -1.0339 | |
| 82 | P | L | -0.7181 | |
| 83 | N | L | -1.3090 | |
| 84 | A | L | -0.4831 | |
| 85 | K | L | -1.3694 | |
| 86 | V | L | 1.6820 | |
| 87 | W | L | 1.2909 | |
| 88 | Q | L | -1.3159 | |
| 89 | E | L | -1.6708 | |
| 90 | I | L | 1.6787 |