| Chain sequence(s) |
A: VSVRTPEGIIATGCDKLGCYIGQRSRLGVQVIILPGRIISPNTQLGPRVIVERNLPTGTYSLRQELIRTGD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:28)
[INFO] Main: Simulation completed successfully. (00:00:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | -0.4585 | |
| 2 | S | A | 0.2016 | |
| 3 | V | A | 0.0000 | |
| 4 | R | A | -1.1710 | |
| 5 | T | A | -0.7873 | |
| 6 | P | A | -1.2469 | |
| 7 | E | A | -1.6794 | |
| 8 | G | A | -0.2775 | |
| 9 | I | A | 1.4942 | |
| 10 | I | A | 1.5537 | |
| 11 | A | A | 0.9135 | |
| 12 | T | A | 0.2124 | |
| 13 | G | A | -0.6258 | |
| 14 | C | A | -1.1009 | |
| 15 | D | A | -2.3466 | |
| 16 | K | A | -2.2377 | |
| 17 | L | A | -0.6136 | |
| 18 | G | A | -0.1913 | |
| 19 | C | A | 0.7572 | |
| 20 | Y | A | 1.3566 | |
| 21 | I | A | 0.8020 | |
| 22 | G | A | -0.6782 | |
| 23 | Q | A | -2.2450 | |
| 24 | R | A | -3.1064 | |
| 25 | S | A | -2.4801 | |
| 26 | R | A | -2.3725 | |
| 27 | L | A | -0.3627 | |
| 28 | G | A | -0.0529 | |
| 29 | V | A | 0.8694 | |
| 30 | Q | A | -0.2021 | |
| 31 | V | A | 0.8614 | |
| 32 | I | A | 1.6583 | |
| 33 | I | A | 0.9687 | |
| 34 | L | A | 0.1894 | |
| 35 | P | A | -0.4781 | |
| 36 | G | A | 0.0000 | |
| 37 | R | A | -0.8758 | |
| 38 | I | A | 0.2039 | |
| 39 | I | A | 0.0000 | |
| 40 | S | A | -0.4681 | |
| 41 | P | A | -1.4846 | |
| 42 | N | A | -2.3283 | |
| 43 | T | A | 0.0000 | |
| 44 | Q | A | -1.8944 | |
| 45 | L | A | 0.0000 | |
| 46 | G | A | -0.2718 | |
| 47 | P | A | 0.0140 | |
| 48 | R | A | -0.7504 | |
| 49 | V | A | 0.0000 | |
| 50 | I | A | 1.1218 | |
| 51 | V | A | 0.0000 | |
| 52 | E | A | -2.0286 | |
| 53 | R | A | -2.7777 | |
| 54 | N | A | -1.7189 | |
| 55 | L | A | -0.6980 | |
| 56 | P | A | -0.4624 | |
| 57 | T | A | -0.5604 | |
| 58 | G | A | -0.5355 | |
| 59 | T | A | -0.7259 | |
| 60 | Y | A | -0.0196 | |
| 61 | S | A | -0.4393 | |
| 62 | L | A | -0.5470 | |
| 63 | R | A | -2.2835 | |
| 64 | Q | A | -2.1168 | |
| 65 | E | A | -1.6166 | |
| 66 | L | A | 0.9058 | |
| 67 | I | A | 1.2101 | |
| 68 | R | A | -1.1230 | |
| 69 | T | A | -0.7537 | |
| 70 | G | A | -1.6188 | |
| 71 | D | A | -2.3230 |