| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFRDIVKNGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEYVHDGADVRVAFSFDPKQTQLFIVGCEPPTGEHWDRAPPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPDGHPLPDEPPPSKLYVKPPPSSPYAVRPPTNYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPLPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.8710 | |
| 2 | L | A | 1.8120 | |
| 3 | P | A | 0.5184 | |
| 4 | P | A | 0.1694 | |
| 5 | T | A | -0.0423 | |
| 6 | T | A | -0.0666 | |
| 7 | P | A | 0.2652 | |
| 8 | V | A | 1.2318 | |
| 9 | A | A | 0.0523 | |
| 10 | K | A | -0.9998 | |
| 11 | V | A | -0.1481 | |
| 12 | Q | A | -1.3920 | |
| 13 | S | A | -1.5403 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4099 | |
| 16 | E | A | -2.4345 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4621 | |
| 20 | P | A | 0.1302 | |
| 21 | T | A | 0.1590 | |
| 22 | S | A | -0.0961 | |
| 23 | L | A | 0.0914 | |
| 24 | F | A | -0.0358 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2908 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8992 | |
| 31 | R | A | -2.6834 | |
| 32 | L | A | -0.8014 | |
| 33 | L | A | 1.1623 | |
| 34 | T | A | 1.3759 | |
| 35 | V | A | 1.8437 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2574 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.7327 | |
| 40 | R | A | -1.7946 | |
| 41 | D | A | -0.9599 | |
| 42 | I | A | 0.8176 | |
| 43 | V | A | 1.0232 | |
| 44 | K | A | -1.1719 | |
| 45 | N | A | -1.9256 | |
| 46 | G | A | -1.2255 | |
| 47 | K | A | -0.9588 | |
| 48 | V | A | 1.4604 | |
| 49 | V | A | 2.0418 | |
| 50 | V | A | 1.2357 | |
| 51 | P | A | 0.4179 | |
| 52 | K | A | -0.6895 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1642 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3954 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2365 | |
| 70 | K | A | -1.7842 | |
| 71 | F | A | -0.6262 | |
| 72 | A | A | -0.5721 | |
| 73 | L | A | -0.8606 | |
| 74 | P | A | -1.2062 | |
| 75 | Q | A | -2.5078 | |
| 76 | K | A | -3.1124 | |
| 77 | D | A | -2.9959 | |
| 78 | F | A | -1.6759 | |
| 79 | Y | A | -1.8960 | |
| 80 | D | A | -2.6973 | |
| 81 | P | A | -2.3112 | |
| 82 | E | A | -3.0560 | |
| 83 | K | A | -3.3984 | |
| 84 | E | A | -2.4647 | |
| 85 | R | A | -1.2992 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6815 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9670 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3608 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6904 | |
| 99 | G | A | -0.5206 | |
| 100 | P | A | -0.3701 | |
| 101 | L | A | 0.1138 | |
| 102 | G | A | -0.1603 | |
| 103 | K | A | -0.5731 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4250 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1054 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4154 | |
| 110 | L | A | 0.4352 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -0.9655 | |
| 113 | K | A | -0.3943 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | -1.0295 | |
| 116 | D | A | -1.6177 | |
| 117 | T | A | -1.0704 | |
| 118 | E | A | -1.8515 | |
| 119 | N | A | -2.2438 | |
| 120 | P | A | -1.8370 | |
| 121 | T | A | -1.4600 | |
| 122 | E | A | -1.8372 | |
| 123 | Y | A | -0.0181 | |
| 124 | V | A | -0.2812 | |
| 125 | H | A | -0.6623 | |
| 126 | D | A | -1.7769 | |
| 127 | G | A | -1.6120 | |
| 128 | A | A | -1.3036 | |
| 129 | D | A | -2.0287 | |
| 130 | V | A | -1.1737 | |
| 131 | R | A | -0.7239 | |
| 132 | V | A | 0.4400 | |
| 133 | A | A | 0.4635 | |
| 134 | F | A | 0.2911 | |
| 135 | S | A | -0.0855 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6552 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5633 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2166 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 0.8736 | |
| 157 | D | A | -0.1840 | |
| 158 | R | A | -0.3743 | |
| 159 | A | A | 0.2413 | |
| 160 | P | A | -0.2223 | |
| 161 | P | A | 0.2643 | |
| 162 | C | A | 0.5079 | |
| 163 | P | A | -0.0247 | |
| 164 | G | A | -0.1725 | |
| 165 | L | A | 0.3925 | |
| 166 | P | A | -0.2111 | |
| 167 | P | A | -0.3859 | |
| 168 | G | A | -0.4476 | |
| 169 | A | A | -0.0686 | |
| 170 | C | A | 0.5643 | |
| 171 | P | A | 0.4117 | |
| 172 | P | A | 0.8147 | |
| 173 | I | A | 1.8183 | |
| 174 | Q | A | 0.8565 | |
| 175 | L | A | 1.3419 | |
| 176 | V | A | 0.6884 | |
| 177 | N | A | -0.3041 | |
| 178 | S | A | 0.0162 | |
| 179 | V | A | 0.4258 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3732 | |
| 182 | D | A | 0.0710 | |
| 183 | G | A | -0.1622 | |
| 184 | D | A | -0.5443 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1552 | |
| 190 | F | A | 0.0653 | |
| 191 | G | A | -0.0956 | |
| 192 | N | A | -0.2626 | |
| 193 | M | A | -0.2732 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3986 | |
| 197 | E | A | -2.7614 | |
| 198 | L | A | -1.4670 | |
| 199 | Q | A | -2.4923 | |
| 200 | Q | A | -3.2760 | |
| 201 | D | A | -3.5650 | |
| 202 | R | A | -3.3278 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.0145 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3841 | |
| 211 | S | A | -1.9041 | |
| 212 | T | A | -1.4226 | |
| 213 | R | A | -2.0734 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1651 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3833 | |
| 220 | L | A | 0.6142 | |
| 221 | K | A | -1.0962 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8093 | |
| 224 | N | A | -1.4863 | |
| 225 | E | A | -1.2260 | |
| 226 | A | A | -0.5878 | |
| 227 | Y | A | -0.3452 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6738 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0833 | |
| 234 | F | A | 0.2706 | |
| 235 | G | A | -0.8009 | |
| 236 | R | A | -2.5788 | |
| 237 | R | A | -2.8173 | |
| 238 | E | A | -2.0804 | |
| 239 | Q | A | -0.0883 | |
| 240 | V | A | 1.5535 | |
| 241 | Y | A | 1.2791 | |
| 242 | A | A | 0.2071 | |
| 243 | R | A | -1.1403 | |
| 244 | H | A | -1.0339 | |
| 245 | F | A | -0.0272 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.6298 | |
| 249 | A | A | -1.1846 | |
| 250 | G | A | -1.1234 | |
| 251 | P | A | -1.1163 | |
| 252 | D | A | -1.2869 | |
| 253 | G | A | -1.2334 | |
| 254 | H | A | -1.3996 | |
| 255 | P | A | -1.2628 | |
| 256 | L | A | -0.3442 | |
| 257 | P | A | -1.0848 | |
| 258 | D | A | -2.0825 | |
| 259 | E | A | -1.6107 | |
| 260 | P | A | -1.3032 | |
| 261 | P | A | -1.0429 | |
| 262 | P | A | -0.6148 | |
| 263 | S | A | -0.8812 | |
| 264 | K | A | -0.8734 | |
| 265 | L | A | 0.7588 | |
| 266 | Y | A | 0.7212 | |
| 267 | V | A | 1.0040 | |
| 268 | K | A | -0.6284 | |
| 269 | P | A | -0.0912 | |
| 270 | P | A | -0.4466 | |
| 271 | P | A | -0.3186 | |
| 272 | S | A | -0.1174 | |
| 273 | S | A | 0.1404 | |
| 274 | P | A | 0.6118 | |
| 275 | Y | A | 1.2285 | |
| 276 | A | A | 0.6914 | |
| 277 | V | A | 1.5124 | |
| 278 | R | A | 0.1837 | |
| 279 | P | A | -0.3190 | |
| 280 | P | A | 0.0000 | |
| 281 | T | A | -0.5058 | |
| 282 | N | A | -0.6498 | |
| 283 | Y | A | 0.9321 | |
| 284 | F | A | 0.7601 | |
| 285 | G | A | 0.2294 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9565 | |
| 291 | L | A | 1.6317 | |
| 292 | V | A | 0.6555 | |
| 293 | S | A | -0.1456 | |
| 294 | S | A | -0.9487 | |
| 295 | D | A | -1.8420 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0954 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6462 | |
| 301 | R | A | -1.8464 | |
| 302 | P | A | -0.9477 | |
| 303 | F | A | -0.2018 | |
| 304 | W | A | -0.5765 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0931 | |
| 307 | R | A | -2.8371 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2606 | |
| 310 | G | A | -1.2226 | |
| 311 | N | A | -1.2642 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8130 | |
| 319 | N | A | -0.9321 | |
| 320 | E | A | -1.0355 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3048 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0477 | |
| 333 | N | A | 0.5672 | |
| 334 | F | A | 1.7320 | |
| 335 | T | A | 0.8548 | |
| 336 | I | A | 0.4320 | |
| 337 | S | A | -0.9656 | |
| 338 | Q | A | -1.7412 | |
| 339 | Q | A | -1.1402 | |
| 340 | L | A | 0.7137 | |
| 341 | C | A | 0.6126 | |
| 342 | T | A | 0.4577 | |
| 343 | P | A | 0.2611 | |
| 344 | L | A | 1.2224 | |
| 345 | P | A | 0.6361 | |
| 346 | N | A | 0.0174 | |
| 347 | V | A | 1.7172 | |
| 348 | Y | A | 1.5929 | |
| 349 | D | A | 0.1964 | |
| 350 | P | A | -0.4178 | |
| 351 | S | A | -0.3591 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7373 | |
| 354 | K | A | -1.8340 | |
| 355 | N | A | -1.7901 | |
| 356 | Y | A | -0.1124 | |
| 357 | L | A | 0.6272 | |
| 358 | R | A | 0.9623 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3958 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0780 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0503 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6940 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2755 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3204 | |
| 376 | L | A | -1.7280 | |
| 377 | D | A | -1.9923 | |
| 378 | P | A | -0.8821 | |
| 379 | G | A | -0.9160 | |
| 380 | V | A | -0.9433 | |
| 381 | L | A | -0.3228 | |
| 382 | A | A | -0.1219 | |
| 383 | H | A | -0.6240 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -0.6613 | |
| 386 | T | A | -0.1247 | |
| 387 | M | A | -0.1681 | |
| 388 | N | A | -0.7223 | |
| 389 | P | A | -1.0753 | |
| 390 | T | A | -1.3655 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.3689 | |
| 393 | E | A | -2.7363 | |
| 394 | N | A | -2.3991 | |
| 395 | W | A | -1.3939 | |
| 396 | N | A | -1.1636 | |
| 397 | L | A | -0.2078 | |
| 398 | G | A | 0.5127 | |
| 399 | F | A | 2.4077 | |
| 400 | V | A | 1.8261 | |
| 401 | P | A | 0.0534 | |
| 402 | P | A | -1.8578 | |
| 403 | K | A | -3.3138 | |
| 404 | E | A | -3.7630 | |
| 405 | R | A | -3.8871 | |
| 406 | E | A | -3.7776 | |
| 407 | D | A | -2.8662 | |
| 408 | P | A | -1.7636 | |
| 409 | Y | A | -0.9885 | |
| 410 | K | A | -2.1155 | |
| 411 | G | A | -0.6430 | |
| 412 | L | A | 0.6624 | |
| 413 | I | A | 1.5784 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4048 | |
| 416 | E | A | -1.7129 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9587 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0518 | |
| 421 | E | A | -2.7802 | |
| 422 | R | A | -2.6268 | |
| 423 | F | A | -1.2826 | |
| 424 | S | A | -1.4771 | |
| 425 | Q | A | -1.8696 | |
| 426 | D | A | -2.9089 | |
| 427 | L | A | -1.9946 | |
| 428 | D | A | -2.7876 | |
| 429 | Q | A | -2.6293 | |
| 430 | F | A | -1.4371 | |
| 431 | A | A | -0.8961 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5513 | |
| 435 | K | A | -0.6919 | |
| 436 | F | A | 0.1527 | |
| 437 | L | A | 1.0382 | |
| 438 | Y | A | 0.8349 | |
| 439 | Q | A | -0.2650 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine