| Chain sequence(s) |
A: LPAPKNLVVSEVTEDSARLSWTAPDAAFDSFLIQYQESEKVGEAIVLTVPGSERSYDLTGLCPGTEYTVSIYGVKGGHRSNPLSAIFTTGG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:39)
[INFO] Main: Simulation completed successfully. (00:00:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | -0.0031 | |
| 2 | P | A | -0.3433 | |
| 3 | A | A | -0.8263 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -1.7058 | |
| 6 | N | A | -1.3500 | |
| 7 | L | A | -0.0829 | |
| 8 | V | A | 1.2459 | |
| 9 | V | A | 0.5931 | |
| 10 | S | A | -0.7038 | |
| 11 | E | A | -1.9277 | |
| 12 | V | A | -1.1410 | |
| 13 | T | A | -1.6879 | |
| 14 | E | A | -2.5545 | |
| 15 | D | A | -2.0913 | |
| 16 | S | A | -1.8237 | |
| 17 | A | A | 0.0000 | |
| 18 | R | A | -1.5895 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.4552 | |
| 21 | W | A | 0.0000 | |
| 22 | T | A | -1.1754 | |
| 23 | A | A | -1.3264 | |
| 24 | P | A | -1.2791 | |
| 25 | D | A | -2.2209 | |
| 26 | A | A | -1.4761 | |
| 27 | A | A | -1.1210 | |
| 28 | F | A | 0.0000 | |
| 29 | D | A | -2.6921 | |
| 30 | S | A | -1.5941 | |
| 31 | F | A | 0.0000 | |
| 32 | L | A | 0.3910 | |
| 33 | I | A | 0.0000 | |
| 34 | Q | A | 0.4464 | |
| 35 | Y | A | 0.0000 | |
| 36 | Q | A | -0.9516 | |
| 37 | E | A | -1.4932 | |
| 38 | S | A | -1.4285 | |
| 39 | E | A | -2.6465 | |
| 40 | K | A | -2.3603 | |
| 41 | V | A | -0.1668 | |
| 42 | G | A | -1.2082 | |
| 43 | E | A | -1.5946 | |
| 44 | A | A | -0.4086 | |
| 45 | I | A | 0.8716 | |
| 46 | V | A | 1.7019 | |
| 47 | L | A | 1.2643 | |
| 48 | T | A | 0.4570 | |
| 49 | V | A | 0.0000 | |
| 50 | P | A | -1.0730 | |
| 51 | G | A | 0.0000 | |
| 52 | S | A | -1.5918 | |
| 53 | E | A | -1.5061 | |
| 54 | R | A | -0.9651 | |
| 55 | S | A | -0.7765 | |
| 56 | Y | A | -0.9522 | |
| 57 | D | A | -1.9619 | |
| 58 | L | A | 0.0000 | |
| 59 | T | A | -1.2367 | |
| 60 | G | A | -0.9688 | |
| 61 | L | A | 0.0000 | |
| 62 | C | A | -0.7138 | |
| 63 | P | A | -1.6134 | |
| 64 | G | A | -1.4509 | |
| 65 | T | A | 0.0000 | |
| 66 | E | A | -1.2228 | |
| 67 | Y | A | 0.0000 | |
| 68 | T | A | 0.0556 | |
| 69 | V | A | 0.0000 | |
| 70 | S | A | 0.1899 | |
| 71 | I | A | 0.0000 | |
| 72 | Y | A | -0.6294 | |
| 73 | G | A | 0.0000 | |
| 74 | V | A | -1.9636 | |
| 75 | K | A | -2.5850 | |
| 76 | G | A | -2.1299 | |
| 77 | G | A | -2.1096 | |
| 78 | H | A | -2.4365 | |
| 79 | R | A | -2.4790 | |
| 80 | S | A | 0.0000 | |
| 81 | N | A | -1.4257 | |
| 82 | P | A | -1.0036 | |
| 83 | L | A | -0.5762 | |
| 84 | S | A | 0.1014 | |
| 85 | A | A | 1.1762 | |
| 86 | I | A | 1.8936 | |
| 87 | F | A | 0.0000 | |
| 88 | T | A | -0.4393 | |
| 89 | T | A | 0.0000 | |
| 90 | G | A | -1.5447 | |
| 91 | G | A | -1.4794 |