Project name: query_structure

Status: done

Started: 2026-03-16 20:26:48
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Chain sequence(s) A: LPAPKNLVVSEVTEDSARLSWTAPDAAFDSFLIQYQESEKVGEAIVLTVPGSERSYDLTGLCPGTEYTVSIYGVKGGHRSNPLSAIFTTGG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:39)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:39)
Show buried residues

Minimal score value
-2.6921
Maximal score value
1.8936
Average score
-0.7679
Total score value
-69.8764

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A -0.0031
2 P A -0.3433
3 A A -0.8263
4 P A 0.0000
5 K A -1.7058
6 N A -1.3500
7 L A -0.0829
8 V A 1.2459
9 V A 0.5931
10 S A -0.7038
11 E A -1.9277
12 V A -1.1410
13 T A -1.6879
14 E A -2.5545
15 D A -2.0913
16 S A -1.8237
17 A A 0.0000
18 R A -1.5895
19 L A 0.0000
20 S A -0.4552
21 W A 0.0000
22 T A -1.1754
23 A A -1.3264
24 P A -1.2791
25 D A -2.2209
26 A A -1.4761
27 A A -1.1210
28 F A 0.0000
29 D A -2.6921
30 S A -1.5941
31 F A 0.0000
32 L A 0.3910
33 I A 0.0000
34 Q A 0.4464
35 Y A 0.0000
36 Q A -0.9516
37 E A -1.4932
38 S A -1.4285
39 E A -2.6465
40 K A -2.3603
41 V A -0.1668
42 G A -1.2082
43 E A -1.5946
44 A A -0.4086
45 I A 0.8716
46 V A 1.7019
47 L A 1.2643
48 T A 0.4570
49 V A 0.0000
50 P A -1.0730
51 G A 0.0000
52 S A -1.5918
53 E A -1.5061
54 R A -0.9651
55 S A -0.7765
56 Y A -0.9522
57 D A -1.9619
58 L A 0.0000
59 T A -1.2367
60 G A -0.9688
61 L A 0.0000
62 C A -0.7138
63 P A -1.6134
64 G A -1.4509
65 T A 0.0000
66 E A -1.2228
67 Y A 0.0000
68 T A 0.0556
69 V A 0.0000
70 S A 0.1899
71 I A 0.0000
72 Y A -0.6294
73 G A 0.0000
74 V A -1.9636
75 K A -2.5850
76 G A -2.1299
77 G A -2.1096
78 H A -2.4365
79 R A -2.4790
80 S A 0.0000
81 N A -1.4257
82 P A -1.0036
83 L A -0.5762
84 S A 0.1014
85 A A 1.1762
86 I A 1.8936
87 F A 0.0000
88 T A -0.4393
89 T A 0.0000
90 G A -1.5447
91 G A -1.4794
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Laboratory of Theory of Biopolymers 2018