Project name: query_structure

Status: done

Started: 2026-03-16 23:19:12
Settings
Chain sequence(s) A: GCPRILIRCKQDSDCLAGCVCGPNGFCGSPAA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:17)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:18)
Show buried residues

Minimal score value
-3.2336
Maximal score value
1.952
Average score
-0.6793
Total score value
-21.0589

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.8071
2 C A 0.0000
3 P A -0.0836
4 R A -0.5346
5 I A 1.9499
6 L A 1.9520
7 I A 0.7447
8 R A -1.5900
9 C A 0.0000
10 K A -3.2336
11 Q A -3.2276
12 D A -2.5827
13 S A -1.7490
14 D A -2.1168
15 C A -0.6828
16 L A 0.9235
17 A A 0.0894
18 G A -0.4248
19 C A -0.3900
20 V A -0.6689
21 C A -1.6297
22 G A -1.2139
23 P A -1.0482
24 N A -1.6271
25 G A -1.6506
26 F A -0.3813
27 C A 0.0000
28 G A -0.2285
29 S A -0.5077
30 P A -0.2929
31 A A -0.0470
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Laboratory of Theory of Biopolymers 2018