| Chain sequence(s) |
A: GCPRILIRCKQDSDCLAGCVCGPNGFCGSPAA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:17)
[INFO] Main: Simulation completed successfully. (00:00:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.8071 | |
| 2 | C | A | 0.0000 | |
| 3 | P | A | -0.0836 | |
| 4 | R | A | -0.5346 | |
| 5 | I | A | 1.9499 | |
| 6 | L | A | 1.9520 | |
| 7 | I | A | 0.7447 | |
| 8 | R | A | -1.5900 | |
| 9 | C | A | 0.0000 | |
| 10 | K | A | -3.2336 | |
| 11 | Q | A | -3.2276 | |
| 12 | D | A | -2.5827 | |
| 13 | S | A | -1.7490 | |
| 14 | D | A | -2.1168 | |
| 15 | C | A | -0.6828 | |
| 16 | L | A | 0.9235 | |
| 17 | A | A | 0.0894 | |
| 18 | G | A | -0.4248 | |
| 19 | C | A | -0.3900 | |
| 20 | V | A | -0.6689 | |
| 21 | C | A | -1.6297 | |
| 22 | G | A | -1.2139 | |
| 23 | P | A | -1.0482 | |
| 24 | N | A | -1.6271 | |
| 25 | G | A | -1.6506 | |
| 26 | F | A | -0.3813 | |
| 27 | C | A | 0.0000 | |
| 28 | G | A | -0.2285 | |
| 29 | S | A | -0.5077 | |
| 30 | P | A | -0.2929 | |
| 31 | A | A | -0.0470 |