Project name: query_structure

Status: done

Started: 2026-03-16 23:26:11
Settings
Chain sequence(s) A: GLPCGETCFTGKCYTPGCSCSYPICKKIN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:20)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:21)
Show buried residues

Minimal score value
-0.9093
Maximal score value
1.8021
Average score
0.1989
Total score value
5.7695

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A 0.0721
2 L A 0.9165
3 P A 0.0616
4 C A -0.2660
5 G A -0.6199
6 E A -0.4801
7 T A 0.3313
8 C A 0.0000
9 F A 1.8021
10 T A 0.4340
11 G A -0.1015
12 K A -0.9093
13 C A -0.1797
14 Y A 0.7910
15 T A -0.0277
16 P A -0.1329
17 G A -0.2912
18 C A -0.1737
19 S A 0.0038
20 C A 0.5703
21 S A 0.6795
22 Y A 1.5265
23 P A 1.1746
24 I A 0.6996
25 C A 0.0000
26 K A -0.2334
27 K A -0.2763
28 I A 0.9247
29 N A -0.5264
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Laboratory of Theory of Biopolymers 2018