| Chain sequence(s) |
A: GLPCGETCFTGKCYTPGCSCSYPICKKIN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:20)
[INFO] Main: Simulation completed successfully. (00:00:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | 0.0721 | |
| 2 | L | A | 0.9165 | |
| 3 | P | A | 0.0616 | |
| 4 | C | A | -0.2660 | |
| 5 | G | A | -0.6199 | |
| 6 | E | A | -0.4801 | |
| 7 | T | A | 0.3313 | |
| 8 | C | A | 0.0000 | |
| 9 | F | A | 1.8021 | |
| 10 | T | A | 0.4340 | |
| 11 | G | A | -0.1015 | |
| 12 | K | A | -0.9093 | |
| 13 | C | A | -0.1797 | |
| 14 | Y | A | 0.7910 | |
| 15 | T | A | -0.0277 | |
| 16 | P | A | -0.1329 | |
| 17 | G | A | -0.2912 | |
| 18 | C | A | -0.1737 | |
| 19 | S | A | 0.0038 | |
| 20 | C | A | 0.5703 | |
| 21 | S | A | 0.6795 | |
| 22 | Y | A | 1.5265 | |
| 23 | P | A | 1.1746 | |
| 24 | I | A | 0.6996 | |
| 25 | C | A | 0.0000 | |
| 26 | K | A | -0.2334 | |
| 27 | K | A | -0.2763 | |
| 28 | I | A | 0.9247 | |
| 29 | N | A | -0.5264 |