Project name: 7L3N

Status: done

Started: 2026-03-29 08:23:51
Settings
Chain sequence(s) H: QVQLVQSGAEVKKPGSSVKVSCKASGGTFSNYAISWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARGYYEARHYYYYYAMDVWGQGTAVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQSISSYLSWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTITSLQPEDFATYYCQQSYSTPRTFGQGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:21)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:23)
Show buried residues

Minimal score value
-3.1249
Maximal score value
2.4154
Average score
-0.4677
Total score value
-108.5038

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.5154
2 V H -1.0169
3 Q H -1.1558
4 L H 0.0000
5 V H 0.2429
6 Q H 0.0000
7 S H -0.5862
8 G H -0.6054
9 A H 0.0292
11 E H 0.0556
12 V H 0.9924
13 K H -0.8929
14 K H -2.1780
15 P H -2.0777
16 G H -1.6331
17 S H -1.2710
18 S H -1.4094
19 V H 0.0000
20 K H -2.0049
21 V H 0.0000
22 S H -0.5002
23 C H 0.0000
24 K H -0.6595
25 A H 0.0000
26 S H -0.8276
27 G H -1.1840
28 G H -0.9922
29 T H -0.8899
30 F H 0.0000
35 S H -0.0463
36 N H -0.0353
37 Y H 0.1422
38 A H 0.0000
39 I H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.5401
45 A H -0.9504
46 P H -0.9875
47 G H -1.2149
48 Q H -1.8215
49 G H -1.2902
50 L H 0.0000
51 E H -0.5951
52 W H 0.0000
53 M H 0.0000
54 G H 0.0000
55 R H 0.0218
56 I H 0.0000
57 I H 0.0000
58 P H 0.0000
59 I H 1.9655
62 L H 2.4154
63 G H 1.2999
64 I H 2.0128
65 A H 0.7253
66 N H -0.1548
67 Y H -0.6823
68 A H 0.0000
69 Q H -2.2277
70 K H -2.4825
71 F H 0.0000
72 Q H -2.2643
74 G H -1.5889
75 R H -1.4955
76 V H 0.0000
77 T H -0.8206
78 I H 0.0000
79 T H -0.2127
80 A H -0.2808
81 D H -1.4289
82 K H -1.6637
83 S H -1.2641
84 T H -1.0137
85 S H 0.0000
86 T H 0.0000
87 A H 0.0000
88 Y H -0.4519
89 M H 0.0000
90 E H -1.4288
91 L H 0.0000
92 S H -1.2111
93 S H -1.3156
94 L H 0.0000
95 R H -3.1249
96 S H -2.3498
97 E H -2.4993
98 D H 0.0000
99 T H -0.8278
100 A H 0.0000
101 V H 0.2272
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H -0.1600
107 G H 0.0000
108 Y H 0.2536
109 Y H 0.0603
110 E H -0.7360
111 A H -0.8577
111A R H -1.5514
111B H H -0.1348
112C Y H 1.5119
112B Y H 2.0230
112A Y H 1.5236
112 Y H 1.7205
113 Y H 1.2671
114 A H 0.0000
115 M H 0.0000
116 D H -0.4610
117 V H 0.0000
118 W H 0.0000
119 G H 0.0000
120 Q H -1.4757
121 G H -0.7399
122 T H 0.0000
123 A H 0.1725
124 V H 0.0000
125 T H -0.2385
126 V H 0.0000
127 S H -1.2926
128 S H -1.2553
1 D L -2.3721
2 I L 0.0000
3 Q L -2.3024
4 M L 0.0000
5 T L -1.3994
6 Q L 0.0000
7 S L -0.7412
8 P L -0.7128
9 S L -0.9988
10 S L -1.3738
11 L L -0.9260
12 S L -1.0570
13 A L 0.0000
14 S L -0.1582
15 V L 0.8025
16 G L -0.4846
17 D L -1.3929
18 R L -2.1024
19 V L 0.0000
20 T L -0.5759
21 I L 0.0000
22 T L -0.7765
23 C L 0.0000
24 R L -2.6825
25 A L 0.0000
26 S L -1.9532
27 Q L -2.0580
28 S L -1.1012
29 I L 0.0000
36 S L -0.3494
37 S L -0.0803
38 Y L 0.8529
39 L L 0.0000
40 S L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.9688
44 Q L 0.0000
45 K L -1.8204
46 P L -1.2506
47 G L -1.6250
48 K L -2.5940
49 A L -1.6446
50 P L 0.0000
51 K L -1.5081
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.6248
56 A L 0.7184
57 A L 0.0000
65 S L -0.2234
66 S L 0.2448
67 L L 0.2520
68 Q L -0.3239
69 S L -0.4572
70 G L -0.5849
71 V L 0.0000
72 P L -0.3966
74 S L -0.4162
75 R L -0.6785
76 F L 0.0000
77 S L -0.2507
78 G L -0.2235
79 S L -0.5938
80 G L -0.9977
83 S L -0.9345
84 G L -1.0412
85 T L -1.6045
86 D L -1.8947
87 F L 0.0000
88 T L -0.6958
89 L L 0.0000
90 T L -0.5548
91 I L 0.0000
92 T L -1.1357
93 S L -0.9862
94 L L 0.0000
95 Q L -0.9482
96 P L -0.6140
97 E L -1.8759
98 D L 0.0000
99 F L -0.7125
100 A L 0.0000
101 T L 0.0000
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 S L 0.0000
108 Y L 0.9387
109 S L 0.0418
114 T L -0.4126
115 P L -0.8153
116 R L 0.0000
117 T L -0.7333
118 F L 0.0000
119 G L 0.0000
120 Q L -1.5684
121 G L 0.0000
122 T L 0.0000
123 K L -2.2174
124 V L 0.0000
125 E L -1.6255
126 I L 0.4362
127 K L -0.9776
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Laboratory of Theory of Biopolymers 2018