| Chain sequence(s) |
A: RLEELIARAEEIAARVEEVLAEAEKEIKKGDAESQKYLPEFLKQAAELRALQAQLLAALRAEDWAAAAATLKQLLAAGEKMIEIMKKAKVPEEIIERAREILREGEKLLAELEAMVAATS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:39)
[INFO] Main: Simulation completed successfully. (00:03:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | R | A | -2.8835 | |
| 2 | L | A | -2.8023 | |
| 3 | E | A | -3.4121 | |
| 4 | E | A | -3.4857 | |
| 5 | L | A | 0.0000 | |
| 6 | I | A | -2.3408 | |
| 7 | A | A | -2.4643 | |
| 8 | R | A | -2.3222 | |
| 9 | A | A | 0.0000 | |
| 10 | E | A | -2.9620 | |
| 11 | E | A | -3.0084 | |
| 12 | I | A | 0.0000 | |
| 13 | A | A | -2.0432 | |
| 14 | A | A | -2.1237 | |
| 15 | R | A | -2.0971 | |
| 16 | V | A | -1.6618 | |
| 17 | E | A | -2.3632 | |
| 18 | E | A | -2.6156 | |
| 19 | V | A | 0.0000 | |
| 20 | L | A | 0.0000 | |
| 21 | A | A | -1.9412 | |
| 22 | E | A | -2.2076 | |
| 23 | A | A | 0.0000 | |
| 24 | E | A | -2.3515 | |
| 25 | K | A | -3.3591 | |
| 26 | E | A | -3.6513 | |
| 27 | I | A | 0.0000 | |
| 28 | K | A | -3.4790 | |
| 29 | K | A | -3.6335 | |
| 30 | G | A | -3.7711 | |
| 31 | D | A | -3.7220 | |
| 32 | A | A | -2.7585 | |
| 33 | E | A | -3.4727 | |
| 34 | S | A | 0.0000 | |
| 35 | Q | A | -3.4841 | |
| 36 | K | A | -3.1692 | |
| 37 | Y | A | -1.9603 | |
| 38 | L | A | -1.5908 | |
| 39 | P | A | -1.3487 | |
| 40 | E | A | -1.8417 | |
| 41 | F | A | 0.0000 | |
| 42 | L | A | -0.6870 | |
| 43 | K | A | -2.1268 | |
| 44 | Q | A | 0.0000 | |
| 45 | A | A | 0.0000 | |
| 46 | A | A | -1.4757 | |
| 47 | E | A | -1.9408 | |
| 48 | L | A | 0.0000 | |
| 49 | R | A | -1.6892 | |
| 50 | A | A | -1.1013 | |
| 51 | L | A | -1.0742 | |
| 52 | Q | A | -1.1431 | |
| 53 | A | A | -0.9125 | |
| 54 | Q | A | -1.0985 | |
| 55 | L | A | 0.0000 | |
| 56 | L | A | -0.9494 | |
| 57 | A | A | -1.1556 | |
| 58 | A | A | 0.0000 | |
| 59 | L | A | 0.0000 | |
| 60 | R | A | -2.7444 | |
| 61 | A | A | -1.9581 | |
| 62 | E | A | -2.6565 | |
| 63 | D | A | -2.1305 | |
| 64 | W | A | 0.0000 | |
| 65 | A | A | -0.6698 | |
| 66 | A | A | -0.7214 | |
| 67 | A | A | 0.0000 | |
| 68 | A | A | 0.0000 | |
| 69 | A | A | -0.7286 | |
| 70 | T | A | 0.0000 | |
| 71 | L | A | 0.0000 | |
| 72 | K | A | -1.8339 | |
| 73 | Q | A | -1.4532 | |
| 74 | L | A | -1.3745 | |
| 75 | L | A | -1.6301 | |
| 76 | A | A | -1.4782 | |
| 77 | A | A | 0.0000 | |
| 78 | G | A | -2.0406 | |
| 79 | E | A | -3.1508 | |
| 80 | K | A | -3.1405 | |
| 81 | M | A | 0.0000 | |
| 82 | I | A | 0.0000 | |
| 83 | E | A | -3.3290 | |
| 84 | I | A | -2.4719 | |
| 85 | M | A | 0.0000 | |
| 86 | K | A | -3.6215 | |
| 87 | K | A | -3.2046 | |
| 88 | A | A | 0.0000 | |
| 89 | K | A | -3.7801 | |
| 90 | V | A | 0.0000 | |
| 91 | P | A | -2.7140 | |
| 92 | E | A | -3.7738 | |
| 93 | E | A | -3.5561 | |
| 94 | I | A | 0.0000 | |
| 95 | I | A | -3.2842 | |
| 96 | E | A | -4.0018 | |
| 97 | R | A | -3.2516 | |
| 98 | A | A | -3.0247 | |
| 99 | R | A | -3.8016 | |
| 100 | E | A | -3.8264 | |
| 101 | I | A | -2.4896 | |
| 102 | L | A | -2.9474 | |
| 103 | R | A | -3.9020 | |
| 104 | E | A | -2.8712 | |
| 105 | G | A | 0.0000 | |
| 106 | E | A | -3.7232 | |
| 107 | K | A | -3.2189 | |
| 108 | L | A | 0.0000 | |
| 109 | L | A | -2.1560 | |
| 110 | A | A | -1.7603 | |
| 111 | E | A | -1.7826 | |
| 112 | L | A | 0.0000 | |
| 113 | E | A | -1.4967 | |
| 114 | A | A | -0.7052 | |
| 115 | M | A | -0.5749 | |
| 116 | V | A | -0.4747 | |
| 117 | A | A | -0.1059 | |
| 118 | A | A | -0.0144 | |
| 119 | T | A | -0.1944 | |
| 120 | S | A | -0.0606 |