| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGRGSVGHPLFNKLGDTENPTAPLHEGADVRVNFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPEGVPLPAAPPPSPLYVPPPPTSPLAVLPSRDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPPINVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9409 | |
| 2 | L | A | 1.9626 | |
| 3 | P | A | 0.6498 | |
| 4 | P | A | 0.3701 | |
| 5 | T | A | 0.1259 | |
| 6 | T | A | 0.1350 | |
| 7 | P | A | 0.1716 | |
| 8 | V | A | 1.2353 | |
| 9 | A | A | 0.0815 | |
| 10 | K | A | -1.0272 | |
| 11 | V | A | -0.1702 | |
| 12 | Q | A | -1.4062 | |
| 13 | S | A | -1.5482 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3989 | |
| 16 | E | A | -2.4285 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4626 | |
| 20 | P | A | 0.1090 | |
| 21 | T | A | 0.1291 | |
| 22 | S | A | -0.1723 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1096 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2960 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9038 | |
| 31 | R | A | -2.6901 | |
| 32 | L | A | -0.8064 | |
| 33 | L | A | 1.1533 | |
| 34 | T | A | 1.3611 | |
| 35 | V | A | 1.8317 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2121 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6017 | |
| 40 | K | A | -1.6301 | |
| 41 | D | A | -0.9852 | |
| 42 | I | A | 0.6675 | |
| 43 | V | A | 0.8667 | |
| 44 | K | A | -1.3050 | |
| 45 | N | A | -1.9875 | |
| 46 | G | A | -1.3031 | |
| 47 | K | A | -1.1102 | |
| 48 | V | A | 1.1975 | |
| 49 | V | A | 1.6430 | |
| 50 | V | A | 1.0726 | |
| 51 | P | A | 0.3432 | |
| 52 | K | A | -0.6838 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1622 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3865 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2689 | |
| 70 | K | A | -1.7925 | |
| 71 | F | A | -0.6462 | |
| 72 | A | A | -0.5739 | |
| 73 | L | A | -0.8746 | |
| 74 | P | A | -1.2813 | |
| 75 | Q | A | -2.4981 | |
| 76 | K | A | -3.1060 | |
| 77 | D | A | -2.9935 | |
| 78 | F | A | -1.6711 | |
| 79 | Y | A | -1.8938 | |
| 80 | D | A | -2.6914 | |
| 81 | P | A | -2.3008 | |
| 82 | E | A | -3.0438 | |
| 83 | K | A | -3.3934 | |
| 84 | E | A | -2.4518 | |
| 85 | R | A | -1.2842 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6234 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9869 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3721 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6894 | |
| 99 | G | A | -0.5272 | |
| 100 | P | A | -0.4163 | |
| 101 | L | A | 0.0206 | |
| 102 | G | A | -0.3628 | |
| 103 | R | A | -0.9694 | |
| 104 | G | A | -0.6543 | |
| 105 | S | A | -0.5959 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.1206 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1764 | |
| 110 | L | A | -0.2098 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1022 | |
| 113 | K | A | -0.4046 | |
| 114 | L | A | -0.9592 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.0216 | |
| 117 | T | A | -0.8411 | |
| 118 | E | A | -1.8024 | |
| 119 | N | A | -1.9562 | |
| 120 | P | A | -1.3340 | |
| 121 | T | A | -0.7041 | |
| 122 | A | A | -0.4382 | |
| 123 | P | A | -0.4067 | |
| 124 | L | A | -0.7753 | |
| 125 | H | A | -1.8217 | |
| 126 | E | A | -2.7031 | |
| 127 | G | A | -2.0695 | |
| 128 | A | A | -1.4476 | |
| 129 | D | A | -2.1532 | |
| 130 | V | A | -1.4241 | |
| 131 | R | A | -1.0054 | |
| 132 | V | A | -0.2619 | |
| 133 | N | A | -0.9034 | |
| 134 | F | A | -0.3913 | |
| 135 | S | A | -0.3788 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5821 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5573 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2264 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1257 | |
| 157 | D | A | 0.3517 | |
| 158 | I | A | 0.8338 | |
| 159 | A | A | 0.1163 | |
| 160 | E | A | -1.4789 | |
| 161 | P | A | -0.2324 | |
| 162 | C | A | 0.1842 | |
| 163 | P | A | -0.1758 | |
| 164 | G | A | -0.0875 | |
| 165 | L | A | 0.5754 | |
| 166 | P | A | -0.1230 | |
| 167 | P | A | -0.3432 | |
| 168 | G | A | -0.4260 | |
| 169 | A | A | 0.2981 | |
| 170 | C | A | 1.0995 | |
| 171 | P | A | 0.5500 | |
| 172 | P | A | 0.7830 | |
| 173 | I | A | 2.0457 | |
| 174 | Q | A | 0.8504 | |
| 175 | L | A | 1.4466 | |
| 176 | V | A | 0.8312 | |
| 177 | N | A | -0.3113 | |
| 178 | S | A | -0.1102 | |
| 179 | V | A | 0.3941 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3845 | |
| 182 | D | A | 0.0865 | |
| 183 | G | A | -0.1493 | |
| 184 | D | A | -0.5429 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1643 | |
| 190 | F | A | 0.0626 | |
| 191 | G | A | -0.1048 | |
| 192 | N | A | -0.2780 | |
| 193 | M | A | -0.1498 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3988 | |
| 197 | E | A | -2.6052 | |
| 198 | L | A | -1.2171 | |
| 199 | Q | A | -2.5529 | |
| 200 | Q | A | -3.3218 | |
| 201 | D | A | -3.4940 | |
| 202 | R | A | -3.3439 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2196 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3663 | |
| 211 | S | A | -1.9007 | |
| 212 | T | A | -1.4649 | |
| 213 | R | A | -2.1326 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1574 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2995 | |
| 220 | L | A | 0.5458 | |
| 221 | K | A | -1.2316 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8545 | |
| 224 | N | A | -1.5366 | |
| 225 | E | A | -1.2684 | |
| 226 | A | A | -0.6049 | |
| 227 | Y | A | -0.3647 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6772 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0668 | |
| 234 | F | A | 0.2558 | |
| 235 | G | A | -0.8190 | |
| 236 | R | A | -2.5978 | |
| 237 | R | A | -2.8520 | |
| 238 | E | A | -2.1248 | |
| 239 | Q | A | -0.1204 | |
| 240 | V | A | 1.5157 | |
| 241 | Y | A | 1.2770 | |
| 242 | A | A | 0.1893 | |
| 243 | R | A | -1.1719 | |
| 244 | H | A | -1.0136 | |
| 245 | F | A | 0.0260 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.6437 | |
| 249 | A | A | -1.3214 | |
| 250 | G | A | -1.1579 | |
| 251 | P | A | -0.8396 | |
| 252 | E | A | -0.4979 | |
| 253 | G | A | 0.0360 | |
| 254 | V | A | 1.2280 | |
| 255 | P | A | 0.4296 | |
| 256 | L | A | 0.7130 | |
| 257 | P | A | 0.2963 | |
| 258 | A | A | -0.0332 | |
| 259 | A | A | 0.2463 | |
| 260 | P | A | -0.2694 | |
| 261 | P | A | 0.0172 | |
| 262 | P | A | 0.0730 | |
| 263 | S | A | 0.5808 | |
| 264 | P | A | 0.7110 | |
| 265 | L | A | 1.8576 | |
| 266 | Y | A | 1.7629 | |
| 267 | V | A | 1.9365 | |
| 268 | P | A | 1.2269 | |
| 269 | P | A | 0.7857 | |
| 270 | P | A | -0.0611 | |
| 271 | P | A | -0.0301 | |
| 272 | T | A | -0.1359 | |
| 273 | S | A | 0.4523 | |
| 274 | P | A | 0.6425 | |
| 275 | L | A | 1.8971 | |
| 276 | A | A | 1.4249 | |
| 277 | V | A | 2.4062 | |
| 278 | L | A | 1.6546 | |
| 279 | P | A | 0.0876 | |
| 280 | S | A | 0.0000 | |
| 281 | R | A | -0.6600 | |
| 282 | D | A | -0.9743 | |
| 283 | Y | A | 0.6252 | |
| 284 | F | A | 0.5933 | |
| 285 | G | A | 0.2139 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9267 | |
| 291 | L | A | 1.5909 | |
| 292 | V | A | 0.5956 | |
| 293 | S | A | -0.1485 | |
| 294 | S | A | -0.9513 | |
| 295 | D | A | -1.8430 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1149 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6668 | |
| 301 | R | A | -1.9101 | |
| 302 | P | A | -1.0069 | |
| 303 | F | A | -0.1883 | |
| 304 | W | A | -0.5472 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0730 | |
| 307 | R | A | -2.8285 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2645 | |
| 310 | G | A | -1.2266 | |
| 311 | N | A | -1.2636 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7641 | |
| 319 | N | A | -0.8405 | |
| 320 | E | A | -1.0273 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.4126 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.2040 | |
| 333 | N | A | 0.4979 | |
| 334 | F | A | 1.7926 | |
| 335 | T | A | 0.8945 | |
| 336 | I | A | 0.4694 | |
| 337 | S | A | -0.8116 | |
| 338 | Q | A | -1.4793 | |
| 339 | Q | A | -0.8628 | |
| 340 | L | A | 0.8266 | |
| 341 | C | A | 0.4583 | |
| 342 | T | A | 0.1738 | |
| 343 | P | A | -0.2534 | |
| 344 | P | A | 0.0780 | |
| 345 | I | A | 0.5825 | |
| 346 | N | A | -0.0545 | |
| 347 | V | A | 1.7114 | |
| 348 | Y | A | 1.5535 | |
| 349 | D | A | 0.0843 | |
| 350 | P | A | -0.3392 | |
| 351 | S | A | -0.2788 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.6005 | |
| 354 | K | A | -1.6852 | |
| 355 | N | A | -1.7076 | |
| 356 | Y | A | -0.0807 | |
| 357 | L | A | 0.6663 | |
| 358 | R | A | 1.0087 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3888 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0837 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0578 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6892 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3036 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3177 | |
| 376 | L | A | -1.7169 | |
| 377 | D | A | -2.0051 | |
| 378 | P | A | -1.0429 | |
| 379 | G | A | -1.0144 | |
| 380 | V | A | -0.9360 | |
| 381 | L | A | -0.5289 | |
| 382 | A | A | -0.6499 | |
| 383 | H | A | -0.8024 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3856 | |
| 386 | T | A | -0.5399 | |
| 387 | M | A | -0.2890 | |
| 388 | N | A | -0.8539 | |
| 389 | P | A | -1.2216 | |
| 390 | T | A | -1.4036 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.3990 | |
| 393 | E | A | -2.7236 | |
| 394 | N | A | -2.4363 | |
| 395 | W | A | -1.3239 | |
| 396 | N | A | -1.1010 | |
| 397 | L | A | -0.1880 | |
| 398 | G | A | 0.5266 | |
| 399 | F | A | 2.4070 | |
| 400 | V | A | 1.8137 | |
| 401 | P | A | 0.0464 | |
| 402 | P | A | -1.8085 | |
| 403 | K | A | -3.2869 | |
| 404 | E | A | -3.7929 | |
| 405 | R | A | -3.7917 | |
| 406 | E | A | -3.7350 | |
| 407 | D | A | -2.8471 | |
| 408 | P | A | -1.7470 | |
| 409 | Y | A | -0.9848 | |
| 410 | K | A | -2.1054 | |
| 411 | G | A | -0.6320 | |
| 412 | L | A | 0.6796 | |
| 413 | I | A | 1.5870 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4054 | |
| 416 | E | A | -1.7181 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9643 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0634 | |
| 421 | E | A | -2.7920 | |
| 422 | R | A | -2.6523 | |
| 423 | F | A | -1.2905 | |
| 424 | S | A | -1.4827 | |
| 425 | Q | A | -1.9363 | |
| 426 | D | A | -2.9821 | |
| 427 | L | A | -2.1621 | |
| 428 | D | A | -3.0251 | |
| 429 | Q | A | -2.7517 | |
| 430 | F | A | -1.5905 | |
| 431 | A | A | -1.1174 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.2170 | |
| 435 | K | A | -1.0559 | |
| 436 | F | A | -0.0734 | |
| 437 | L | A | 0.8061 | |
| 438 | Y | A | 0.6466 | |
| 439 | Q | A | -0.3749 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine