| Chain sequence(s) |
H: EVKLQESGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSS
L: DIVLTQSPSSLSASLGDTITITCHASQNINVWLSWYQQKPGNIPKLLIYKASNLHTGVPSRFSGSGSGTGFTLTISSLQPEDIATYYCQQGQSYPLTFGGGTK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:59)
[INFO] Main: Simulation completed successfully. (00:01:00)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.0668 | |
| 2 | V | H | -1.0980 | |
| 3 | K | H | -1.5220 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.1280 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.8132 | |
| 8 | G | H | -0.7730 | |
| 9 | G | H | -0.2990 | |
| 11 | G | H | 0.3745 | |
| 12 | L | H | 1.1696 | |
| 13 | V | H | -0.1255 | |
| 14 | Q | H | -1.6396 | |
| 15 | P | H | -2.1014 | |
| 16 | G | H | -2.2373 | |
| 17 | G | H | -1.6521 | |
| 18 | S | H | -1.4456 | |
| 19 | L | H | -0.6358 | |
| 20 | K | H | -1.2837 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.5728 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.8585 | |
| 25 | T | H | 0.0000 | |
| 26 | S | H | -1.2618 | |
| 27 | G | H | -1.2262 | |
| 28 | F | H | -0.7119 | |
| 29 | T | H | -0.6704 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -1.6027 | |
| 36 | D | H | -1.8894 | |
| 37 | Y | H | -0.6822 | |
| 38 | Y | H | -0.1884 | |
| 39 | M | H | 0.0000 | |
| 40 | Y | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | 0.0000 | |
| 45 | T | H | -2.1274 | |
| 46 | P | H | -2.0860 | |
| 47 | E | H | -3.2145 | |
| 48 | K | H | -3.3516 | |
| 49 | R | H | -3.3059 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9751 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | Y | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | 0.0000 | |
| 58 | N | H | -1.3849 | |
| 59 | G | H | -1.3215 | |
| 62 | G | H | -0.9216 | |
| 63 | G | H | -0.8343 | |
| 64 | S | H | -0.2440 | |
| 65 | T | H | 0.4473 | |
| 66 | Y | H | 0.8538 | |
| 67 | Y | H | -0.2920 | |
| 68 | P | H | 0.0000 | |
| 69 | D | H | -2.5475 | |
| 70 | T | H | -1.6965 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.4307 | |
| 74 | G | H | -1.9120 | |
| 75 | R | H | -2.0544 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.6291 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.4314 | |
| 80 | R | H | -0.9793 | |
| 81 | D | H | -1.3632 | |
| 82 | N | H | -1.8781 | |
| 83 | A | H | -1.2881 | |
| 84 | K | H | -2.2758 | |
| 85 | N | H | -1.8085 | |
| 86 | T | H | -1.2133 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.3554 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.9837 | |
| 91 | M | H | 0.0000 | |
| 92 | S | H | -1.7943 | |
| 93 | R | H | -2.8447 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -3.2000 | |
| 96 | S | H | -2.1749 | |
| 97 | E | H | -2.5507 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.8221 | |
| 100 | A | H | 0.0000 | |
| 101 | M | H | -0.0783 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | H | H | 0.0000 | |
| 108 | G | H | 0.4208 | |
| 109 | G | H | 0.3622 | |
| 110 | Y | H | 1.2827 | |
| 113 | Y | H | 1.0019 | |
| 114 | A | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | 0.0897 | |
| 117 | Y | H | 0.2344 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -0.9739 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | -0.4330 | |
| 123 | T | H | -0.0036 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.1492 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8690 | |
| 128 | S | H | -0.6102 | |
| 1 | D | L | -1.6779 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.8415 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.2450 | |
| 6 | Q | L | -0.5018 | |
| 7 | S | L | -0.6009 | |
| 8 | P | L | -0.6188 | |
| 9 | S | L | -0.8224 | |
| 10 | S | L | -0.8481 | |
| 11 | L | L | -0.1605 | |
| 12 | S | L | -0.0212 | |
| 13 | A | L | 0.1238 | |
| 14 | S | L | 0.0141 | |
| 15 | L | L | 0.7559 | |
| 16 | G | L | -0.3133 | |
| 17 | D | L | -0.7939 | |
| 18 | T | L | -0.5564 | |
| 19 | I | L | 0.0000 | |
| 20 | T | L | -0.2352 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.5138 | |
| 23 | C | L | 0.0000 | |
| 24 | H | L | -1.2725 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.9475 | |
| 27 | Q | L | -2.1334 | |
| 28 | N | L | -2.2736 | |
| 29 | I | L | 0.0000 | |
| 36 | N | L | -1.2682 | |
| 37 | V | L | -0.2673 | |
| 38 | W | L | 0.2339 | |
| 39 | L | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.8741 | |
| 45 | K | L | -1.2321 | |
| 46 | P | L | -0.9129 | |
| 47 | G | L | -1.2322 | |
| 48 | N | L | -1.7581 | |
| 49 | I | L | -0.6284 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.1058 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.1001 | |
| 56 | K | L | -0.3666 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.5915 | |
| 66 | N | L | -0.6837 | |
| 67 | L | L | 0.0187 | |
| 68 | H | L | -0.3566 | |
| 69 | T | L | -0.2855 | |
| 70 | G | L | -0.4161 | |
| 71 | V | L | -0.2464 | |
| 72 | P | L | -0.3153 | |
| 74 | S | L | -0.4116 | |
| 75 | R | L | -0.6549 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.4234 | |
| 78 | G | L | -0.4816 | |
| 79 | S | L | -0.6552 | |
| 80 | G | L | -0.7264 | |
| 83 | S | L | -0.8973 | |
| 84 | G | L | -1.2836 | |
| 85 | T | L | -1.4311 | |
| 86 | G | L | -0.9848 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.4923 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.2869 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -0.7710 | |
| 93 | S | L | -0.5995 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.4142 | |
| 96 | P | L | -0.2077 | |
| 97 | E | L | -0.9074 | |
| 98 | D | L | 0.0000 | |
| 99 | I | L | 1.0520 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.6688 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | G | L | 0.2548 | |
| 108 | Q | L | -0.5796 | |
| 109 | S | L | -0.4041 | |
| 114 | Y | L | -0.0311 | |
| 115 | P | L | -0.5174 | |
| 116 | L | L | 0.0000 | |
| 117 | T | L | -0.0117 | |
| 118 | F | L | -0.0548 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.3561 | |
| 121 | G | L | -1.3260 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.0600 |