| Chain sequence(s) |
L: KLMGANNPMD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:15)
[INFO] Main: Simulation completed successfully. (00:00:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 269 | K | L | -1.4167 | |
| 270 | L | L | 1.4314 | |
| 271 | M | L | 1.2494 | |
| 272 | G | L | -0.2708 | |
| 273 | A | L | -0.4936 | |
| 274 | N | L | -1.4977 | |
| 275 | N | L | -1.4625 | |
| 276 | P | L | -0.4152 | |
| 277 | M | L | 0.5503 | |
| 278 | D | L | -1.6001 |