Project name: query_structure

Status: done

Started: 2026-03-17 01:09:29
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Chain sequence(s) A: VSDVPRDLEVVAATPTSLLISWDAPAVTVDFYFITYGETGWGYGSYQAFEVPGSKSTATISGLKPGVDYTITVYAYYYDSQRFLHSGSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:36)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:36)
Show buried residues

Minimal score value
-3.3605
Maximal score value
1.685
Average score
-0.4498
Total score value
-43.1765

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.6850
2 S A 0.4134
3 D A -0.0436
4 V A -0.4340
5 P A 0.0000
6 R A -3.0987
7 D A -3.3605
8 L A 0.0000
9 E A -2.1087
10 V A 0.1026
11 V A 1.5439
12 A A 0.8974
13 A A 0.3216
14 T A -0.3480
15 P A -1.1298
16 T A -0.9991
17 S A -0.5296
18 L A 0.0000
19 L A 0.7508
20 I A 0.0000
21 S A -1.1483
22 W A 0.0000
23 D A -3.2176
24 A A -1.6517
25 P A -0.4821
26 A A 0.1861
27 V A 0.5192
28 T A -0.1718
29 V A 0.0000
30 D A -1.0736
31 F A -0.8065
32 Y A 0.0000
33 F A 0.4033
34 I A 0.0000
35 T A -0.0610
36 Y A 0.0000
37 G A 0.0000
38 E A -0.6515
39 T A -0.6326
40 G A -0.0269
41 W A 0.9186
42 G A 0.4611
43 Y A 1.0661
44 G A 0.1982
45 S A 0.1562
46 Y A 0.2796
47 Q A -0.5062
48 A A -0.2522
49 F A -0.3090
50 E A -1.1954
51 V A 0.0000
52 P A -1.3035
53 G A -1.3067
54 S A -1.3441
55 K A -2.2152
56 S A -1.4470
57 T A -0.7843
58 A A 0.0000
59 T A 0.2364
60 I A 0.0000
61 S A -0.6607
62 G A -1.0267
63 L A 0.0000
64 K A -2.3313
65 P A -1.6648
66 G A -1.4560
67 V A -1.3574
68 D A -1.9119
69 Y A 0.0000
70 T A -0.7085
71 I A 0.0000
72 T A 0.1149
73 V A 0.0000
74 Y A 0.4660
75 A A 0.0000
76 Y A 0.1485
77 Y A 0.1964
78 Y A 0.1903
79 D A -0.5424
80 S A -0.9835
81 Q A -1.4856
82 R A -1.2548
83 F A 0.9836
84 L A 1.0717
85 H A 0.2055
86 S A 0.3716
87 G A 0.0000
88 S A -0.1724
89 P A -0.0230
90 I A -0.2376
91 S A -0.6994
92 I A -0.7689
93 N A -1.7039
94 Y A -1.4371
95 R A -2.4865
96 T A -1.5129
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Laboratory of Theory of Biopolymers 2018