| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPAVTVDFYFITYGETGWGYGSYQAFEVPGSKSTATISGLKPGVDYTITVYAYYYDSQRFLHSGSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:36)
[INFO] Main: Simulation completed successfully. (00:00:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.6850 | |
| 2 | S | A | 0.4134 | |
| 3 | D | A | -0.0436 | |
| 4 | V | A | -0.4340 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.0987 | |
| 7 | D | A | -3.3605 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.1087 | |
| 10 | V | A | 0.1026 | |
| 11 | V | A | 1.5439 | |
| 12 | A | A | 0.8974 | |
| 13 | A | A | 0.3216 | |
| 14 | T | A | -0.3480 | |
| 15 | P | A | -1.1298 | |
| 16 | T | A | -0.9991 | |
| 17 | S | A | -0.5296 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7508 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1483 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.2176 | |
| 24 | A | A | -1.6517 | |
| 25 | P | A | -0.4821 | |
| 26 | A | A | 0.1861 | |
| 27 | V | A | 0.5192 | |
| 28 | T | A | -0.1718 | |
| 29 | V | A | 0.0000 | |
| 30 | D | A | -1.0736 | |
| 31 | F | A | -0.8065 | |
| 32 | Y | A | 0.0000 | |
| 33 | F | A | 0.4033 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.0610 | |
| 36 | Y | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -0.6515 | |
| 39 | T | A | -0.6326 | |
| 40 | G | A | -0.0269 | |
| 41 | W | A | 0.9186 | |
| 42 | G | A | 0.4611 | |
| 43 | Y | A | 1.0661 | |
| 44 | G | A | 0.1982 | |
| 45 | S | A | 0.1562 | |
| 46 | Y | A | 0.2796 | |
| 47 | Q | A | -0.5062 | |
| 48 | A | A | -0.2522 | |
| 49 | F | A | -0.3090 | |
| 50 | E | A | -1.1954 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -1.3035 | |
| 53 | G | A | -1.3067 | |
| 54 | S | A | -1.3441 | |
| 55 | K | A | -2.2152 | |
| 56 | S | A | -1.4470 | |
| 57 | T | A | -0.7843 | |
| 58 | A | A | 0.0000 | |
| 59 | T | A | 0.2364 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | -0.6607 | |
| 62 | G | A | -1.0267 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.3313 | |
| 65 | P | A | -1.6648 | |
| 66 | G | A | -1.4560 | |
| 67 | V | A | -1.3574 | |
| 68 | D | A | -1.9119 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | -0.7085 | |
| 71 | I | A | 0.0000 | |
| 72 | T | A | 0.1149 | |
| 73 | V | A | 0.0000 | |
| 74 | Y | A | 0.4660 | |
| 75 | A | A | 0.0000 | |
| 76 | Y | A | 0.1485 | |
| 77 | Y | A | 0.1964 | |
| 78 | Y | A | 0.1903 | |
| 79 | D | A | -0.5424 | |
| 80 | S | A | -0.9835 | |
| 81 | Q | A | -1.4856 | |
| 82 | R | A | -1.2548 | |
| 83 | F | A | 0.9836 | |
| 84 | L | A | 1.0717 | |
| 85 | H | A | 0.2055 | |
| 86 | S | A | 0.3716 | |
| 87 | G | A | 0.0000 | |
| 88 | S | A | -0.1724 | |
| 89 | P | A | -0.0230 | |
| 90 | I | A | -0.2376 | |
| 91 | S | A | -0.6994 | |
| 92 | I | A | -0.7689 | |
| 93 | N | A | -1.7039 | |
| 94 | Y | A | -1.4371 | |
| 95 | R | A | -2.4865 | |
| 96 | T | A | -1.5129 |