| Chain sequence(s) |
A: EVKLEESGGGLVQQPGGSMKLSCVASGFIFSNHWMNWVRQSPEKGLEWVAEIRSKSINSATHYAESVKGRFTISRDDSKSAVYLQMTDLRTEDTGVYYCSRNYYGSTYDYWGQGTTLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:23)
[INFO] Main: Simulation completed successfully. (00:03:25)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.2196 | |
| 2 | V | A | -1.3428 | |
| 3 | K | A | -2.4051 | |
| 4 | L | A | 0.0000 | |
| 5 | E | A | -2.3546 | |
| 6 | E | A | -1.2069 | |
| 7 | S | A | -1.0203 | |
| 8 | G | A | -0.8526 | |
| 9 | G | A | 0.0000 | |
| 10 | G | A | -0.5596 | |
| 11 | L | A | -0.3843 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.8587 | |
| 14 | P | A | -1.9895 | |
| 15 | G | A | -2.0388 | |
| 16 | G | A | -1.4992 | |
| 17 | S | A | -1.3971 | |
| 18 | M | A | -1.1411 | |
| 19 | K | A | -1.6798 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.6552 | |
| 22 | C | A | 0.0000 | |
| 23 | V | A | -0.5756 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.0314 | |
| 26 | G | A | -0.9016 | |
| 27 | F | A | 0.3558 | |
| 28 | I | A | 1.5680 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -0.9920 | |
| 31 | N | A | -0.9625 | |
| 32 | H | A | -0.2305 | |
| 33 | W | A | -0.2736 | |
| 34 | M | A | 0.0000 | |
| 35 | N | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | V | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -0.6004 | |
| 40 | S | A | -1.4667 | |
| 41 | P | A | -1.5779 | |
| 42 | E | A | -2.9854 | |
| 43 | K | A | -2.7978 | |
| 44 | G | A | -1.1472 | |
| 45 | L | A | 0.5665 | |
| 46 | E | A | 0.1003 | |
| 47 | W | A | 0.5533 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | E | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | R | A | -1.0240 | |
| 53 | S | A | 0.0000 | |
| 54 | K | A | -2.2160 | |
| 55 | S | A | -1.0145 | |
| 56 | I | A | -0.0233 | |
| 57 | N | A | -1.3390 | |
| 58 | S | A | -1.2399 | |
| 59 | A | A | -0.6545 | |
| 60 | T | A | -0.4863 | |
| 61 | H | A | -0.8686 | |
| 62 | Y | A | -1.0759 | |
| 63 | A | A | 0.0000 | |
| 64 | E | A | -2.5003 | |
| 65 | S | A | -1.4805 | |
| 66 | V | A | 0.0000 | |
| 67 | K | A | -2.5782 | |
| 68 | G | A | -1.7574 | |
| 69 | R | A | 0.0000 | |
| 70 | F | A | 0.0000 | |
| 71 | T | A | -0.7188 | |
| 72 | I | A | 0.0000 | |
| 73 | S | A | -0.3946 | |
| 74 | R | A | -0.9869 | |
| 75 | D | A | -1.3217 | |
| 76 | D | A | -1.4275 | |
| 77 | S | A | -1.4216 | |
| 78 | K | A | -1.9947 | |
| 79 | S | A | -0.7320 | |
| 80 | A | A | 0.0000 | |
| 81 | V | A | 0.0000 | |
| 82 | Y | A | -0.2681 | |
| 83 | L | A | 0.0000 | |
| 84 | Q | A | -0.9808 | |
| 85 | M | A | 0.0000 | |
| 86 | T | A | -1.5792 | |
| 87 | D | A | -2.5411 | |
| 88 | L | A | 0.0000 | |
| 89 | R | A | -2.5515 | |
| 90 | T | A | -1.8075 | |
| 91 | E | A | -2.7030 | |
| 92 | D | A | 0.0000 | |
| 93 | T | A | -1.0504 | |
| 94 | G | A | 0.0000 | |
| 95 | V | A | 0.2601 | |
| 96 | Y | A | 0.0000 | |
| 97 | Y | A | -0.0505 | |
| 98 | C | A | 0.0000 | |
| 99 | S | A | 0.0000 | |
| 100 | R | A | 0.0000 | |
| 101 | N | A | 0.0000 | |
| 102 | Y | A | 1.0853 | |
| 103 | Y | A | 0.6809 | |
| 104 | G | A | 0.0614 | |
| 105 | S | A | 0.0191 | |
| 106 | T | A | 0.1940 | |
| 107 | Y | A | 0.5238 | |
| 108 | D | A | 0.1065 | |
| 109 | Y | A | 0.5515 | |
| 110 | W | A | -0.0475 | |
| 111 | G | A | -1.1289 | |
| 112 | Q | A | -1.7417 | |
| 113 | G | A | -0.8961 | |
| 114 | T | A | -0.5589 | |
| 115 | T | A | -0.1930 | |
| 116 | L | A | 0.0000 | |
| 117 | T | A | -0.5678 | |
| 118 | V | A | 0.0000 | |
| 119 | S | A | -1.0070 | |
| 120 | S | A | -0.7574 | |
| 121 | A | A | -0.5104 | |
| 122 | S | A | -0.6114 | |
| 123 | T | A | -0.7578 | |
| 124 | K | A | -1.1932 | |
| 125 | G | A | -1.4144 | |
| 126 | P | A | 0.0000 | |
| 127 | S | A | -0.0903 | |
| 128 | V | A | 0.0000 | |
| 129 | F | A | 1.0174 | |
| 130 | P | A | 0.1845 | |
| 131 | L | A | 0.5036 | |
| 132 | A | A | -0.9793 | |
| 133 | P | A | 0.0000 | |
| 134 | S | A | -1.4221 | |
| 135 | S | A | -1.4300 | |
| 136 | K | A | -2.0687 | |
| 137 | S | A | -1.0245 | |
| 138 | T | A | -1.0330 | |
| 139 | S | A | -0.9516 | |
| 140 | G | A | -0.8906 | |
| 141 | G | A | -0.9158 | |
| 142 | T | A | -0.6564 | |
| 143 | A | A | 0.0000 | |
| 144 | A | A | -0.1277 | |
| 145 | L | A | 0.0000 | |
| 146 | G | A | 0.0000 | |
| 147 | C | A | 0.0000 | |
| 148 | L | A | 0.7396 | |
| 149 | V | A | 0.0000 | |
| 150 | K | A | -0.2143 | |
| 151 | D | A | -0.3978 | |
| 152 | Y | A | 0.0000 | |
| 153 | F | A | 0.0000 | |
| 154 | P | A | 0.0000 | |
| 155 | E | A | -0.5031 | |
| 156 | P | A | -0.7098 | |
| 157 | V | A | -0.6347 | |
| 158 | T | A | -0.5534 | |
| 159 | V | A | -0.3834 | |
| 160 | S | A | -0.3759 | |
| 161 | W | A | 0.0000 | |
| 162 | N | A | -0.7670 | |
| 163 | S | A | -0.6656 | |
| 164 | G | A | -0.5127 | |
| 165 | A | A | -0.2319 | |
| 166 | L | A | 0.0344 | |
| 167 | T | A | -0.2388 | |
| 168 | S | A | -0.2900 | |
| 169 | G | A | -0.3244 | |
| 170 | V | A | 0.1308 | |
| 171 | H | A | -0.3138 | |
| 172 | T | A | 0.2006 | |
| 173 | F | A | 0.9750 | |
| 174 | P | A | 0.7194 | |
| 175 | A | A | 1.2765 | |
| 176 | V | A | 2.4908 | |
| 177 | L | A | 2.1688 | |
| 178 | Q | A | 0.7320 | |
| 179 | S | A | 0.0927 | |
| 180 | S | A | -0.2214 | |
| 181 | G | A | 0.1844 | |
| 182 | L | A | 0.2798 | |
| 183 | Y | A | 0.8426 | |
| 184 | S | A | 0.0000 | |
| 185 | L | A | 0.0000 | |
| 186 | S | A | 0.6635 | |
| 187 | S | A | 0.0000 | |
| 188 | V | A | 0.4948 | |
| 189 | V | A | 0.0000 | |
| 190 | T | A | -0.2560 | |
| 191 | V | A | 0.0000 | |
| 192 | P | A | -0.5556 | |
| 193 | S | A | -0.6081 | |
| 194 | S | A | -0.5583 | |
| 195 | S | A | -0.5592 | |
| 196 | L | A | -0.8860 | |
| 197 | G | A | -1.2685 | |
| 198 | T | A | -0.7242 | |
| 199 | Q | A | -1.2819 | |
| 200 | T | A | -1.1054 | |
| 201 | Y | A | 0.0000 | |
| 202 | I | A | -1.2387 | |
| 203 | C | A | 0.0000 | |
| 204 | N | A | -1.5340 | |
| 205 | V | A | 0.0000 | |
| 206 | N | A | -1.9684 | |
| 207 | H | A | 0.0000 | |
| 208 | K | A | -2.6666 | |
| 209 | P | A | -1.5130 | |
| 210 | S | A | -1.7935 | |
| 211 | N | A | -2.5638 | |
| 212 | T | A | -2.0438 | |
| 213 | K | A | -2.6993 | |
| 214 | V | A | -1.8311 | |
| 215 | D | A | -2.6322 | |
| 216 | K | A | -1.9916 | |
| 217 | K | A | -2.3949 | |
| 218 | V | A | 0.0000 | |
| 219 | E | A | -2.7489 | |
| 220 | P | A | -1.8011 | |
| 221 | K | A | -2.3342 |