| Chain sequence(s) |
A: EVQLQASGGGLVEPGGSLRLSCAVSGINFNINHWGWYRQAPGKQREWVATIAIGGATDYADSLKGRFTISRDNMKNTVYLQMNSLRPEDTAVYYCNGVGSKWSVRWGQGTQVTVS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:22)
[INFO] Main: Simulation completed successfully. (00:02:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.6791 | |
| 2 | V | A | -0.9068 | |
| 3 | Q | A | -1.4299 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.5225 | |
| 6 | A | A | 0.0000 | |
| 7 | S | A | -1.1935 | |
| 8 | G | A | -1.0790 | |
| 9 | G | A | -0.7468 | |
| 10 | G | A | -0.0242 | |
| 11 | L | A | 0.8382 | |
| 12 | V | A | 0.0000 | |
| 13 | E | A | -2.1400 | |
| 14 | P | A | -2.2257 | |
| 15 | G | A | -1.8299 | |
| 16 | G | A | -1.3105 | |
| 17 | S | A | -1.4896 | |
| 18 | L | A | -1.0942 | |
| 19 | R | A | -2.0835 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.8005 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.9314 | |
| 24 | V | A | -0.7577 | |
| 25 | S | A | -0.8147 | |
| 26 | G | A | -0.3805 | |
| 27 | I | A | 0.6830 | |
| 28 | N | A | -0.7895 | |
| 29 | F | A | -0.7964 | |
| 30 | N | A | -1.5886 | |
| 31 | I | A | 0.0000 | |
| 32 | N | A | -0.9605 | |
| 33 | H | A | -0.3199 | |
| 34 | W | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | 0.0959 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -1.5779 | |
| 40 | A | A | -1.6838 | |
| 41 | P | A | -1.2114 | |
| 42 | G | A | -1.6973 | |
| 43 | K | A | -2.6923 | |
| 44 | Q | A | -2.6069 | |
| 45 | R | A | -1.9573 | |
| 46 | E | A | -1.0741 | |
| 47 | W | A | -0.1664 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | T | A | -0.5911 | |
| 51 | I | A | 0.0000 | |
| 52 | A | A | -0.1452 | |
| 53 | I | A | 0.3375 | |
| 54 | G | A | -0.2271 | |
| 55 | G | A | -0.4462 | |
| 56 | A | A | -0.3725 | |
| 57 | T | A | -0.8113 | |
| 58 | D | A | -2.0065 | |
| 59 | Y | A | -1.6701 | |
| 60 | A | A | -1.6049 | |
| 61 | D | A | -2.6269 | |
| 62 | S | A | -1.6713 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.8678 | |
| 65 | G | A | -1.8153 | |
| 66 | R | A | -1.4325 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | -1.0691 | |
| 69 | I | A | 0.0000 | |
| 70 | S | A | -0.5249 | |
| 71 | R | A | -0.8571 | |
| 72 | D | A | -1.2164 | |
| 73 | N | A | -1.6880 | |
| 74 | M | A | -0.6415 | |
| 75 | K | A | -1.9544 | |
| 76 | N | A | -1.8331 | |
| 77 | T | A | 0.0000 | |
| 78 | V | A | 0.0000 | |
| 79 | Y | A | -0.5445 | |
| 80 | L | A | 0.0000 | |
| 81 | Q | A | -1.2110 | |
| 82 | M | A | 0.0000 | |
| 83 | N | A | -1.5683 | |
| 84 | S | A | -1.5433 | |
| 85 | L | A | 0.0000 | |
| 86 | R | A | -3.2090 | |
| 87 | P | A | -2.4058 | |
| 88 | E | A | -2.5901 | |
| 89 | D | A | 0.0000 | |
| 90 | T | A | -1.0515 | |
| 91 | A | A | 0.0000 | |
| 92 | V | A | -0.3165 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | -0.3239 | |
| 95 | C | A | 0.0000 | |
| 96 | N | A | 0.0000 | |
| 97 | G | A | 0.0000 | |
| 98 | V | A | 0.2143 | |
| 99 | G | A | 0.0000 | |
| 100 | S | A | -0.8882 | |
| 101 | K | A | -1.0154 | |
| 102 | W | A | 0.5561 | |
| 103 | S | A | 0.5004 | |
| 104 | V | A | 1.6188 | |
| 105 | R | A | 0.6829 | |
| 106 | W | A | 0.1749 | |
| 107 | G | A | -0.9453 | |
| 108 | Q | A | -1.4258 | |
| 109 | G | A | -0.9018 | |
| 110 | T | A | -1.0000 | |
| 111 | Q | A | -0.9292 | |
| 112 | V | A | 0.0000 | |
| 113 | T | A | -0.5016 | |
| 114 | V | A | 0.0000 | |
| 115 | S | A | -1.0999 |