Project name: query_structure

Status: done

Started: 2026-03-16 23:49:49
Settings
Chain sequence(s) A: GLPICGETCLLGKCYTPGCSCRRPVCYKN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:12)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:12)
Show buried residues

Minimal score value
-2.6719
Maximal score value
1.9192
Average score
-0.1606
Total score value
-4.6578

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.3994
2 L A 1.4383
3 P A 0.9353
4 I A 1.9192
5 C A 0.9062
6 G A 0.3654
7 E A 0.0541
8 T A -0.2057
9 C A 0.0000
10 L A 1.2531
11 L A 1.5612
12 G A -0.3069
13 K A -1.0824
14 C A -0.0885
15 Y A 0.7584
16 T A 0.3245
17 P A -0.1987
18 G A -0.7275
19 C A -0.4991
20 S A -1.1238
21 C A -1.2398
22 R A -2.6719
23 R A -2.2224
24 P A -1.0240
25 V A -0.5320
26 C A 0.0000
27 Y A -0.2296
28 K A -0.5360
29 N A -1.0858
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Laboratory of Theory of Biopolymers 2018