| Chain sequence(s) |
H: QVQLVQSGAEVKNPGASVRLSCLTSGYTFATNGLHWVRQAPGQGPEWMGWINAGNGDTQYSRAFQGRLSLTRDTSASTTYLDLASLTSEDTAIYYCARGSTRWLQTDHLDHWGQGTLVTVSS
L: DIQLTQTPSSLSAAVGDRVSITCRASRPIRNSLAWFQQKPGQAPKSLIYGTSTLHSGVPSKFSGSGSGSEFTLTINNLQPEDFATYYCQQYDTYPITFGQGTRLETK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:54)
[INFO] Main: Simulation completed successfully. (00:00:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.4538 | |
| 2 | V | H | -0.9399 | |
| 3 | Q | H | -1.1972 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.2920 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.3490 | |
| 8 | G | H | -0.5076 | |
| 9 | A | H | 0.3471 | |
| 11 | E | H | 0.1831 | |
| 12 | V | H | 1.1717 | |
| 13 | K | H | -0.5173 | |
| 14 | N | H | -1.5176 | |
| 15 | P | H | -1.3515 | |
| 16 | G | H | -1.1109 | |
| 17 | A | H | -0.8818 | |
| 18 | S | H | -1.1113 | |
| 19 | V | H | 0.0000 | |
| 20 | R | H | -2.0130 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2223 | |
| 23 | C | H | 0.0000 | |
| 24 | L | H | 0.8964 | |
| 25 | T | H | 0.0000 | |
| 26 | S | H | -0.4005 | |
| 27 | G | H | -0.9315 | |
| 28 | Y | H | -0.3289 | |
| 29 | T | H | -0.0743 | |
| 30 | F | H | 0.0000 | |
| 35 | A | H | -0.5601 | |
| 36 | T | H | -0.4803 | |
| 37 | N | H | 0.0000 | |
| 38 | G | H | -0.6116 | |
| 39 | L | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.5301 | |
| 45 | A | H | -0.9338 | |
| 46 | P | H | -1.0031 | |
| 47 | G | H | -1.3178 | |
| 48 | Q | H | -1.9079 | |
| 49 | G | H | -1.3789 | |
| 50 | P | H | 0.0000 | |
| 51 | E | H | -1.0407 | |
| 52 | W | H | 0.0000 | |
| 53 | M | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | W | H | -0.2042 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | -1.5995 | |
| 58 | A | H | 0.0000 | |
| 59 | G | H | -1.3365 | |
| 62 | N | H | -1.9885 | |
| 63 | G | H | -1.7510 | |
| 64 | D | H | -1.9647 | |
| 65 | T | H | -1.0340 | |
| 66 | Q | H | -0.8521 | |
| 67 | Y | H | -0.7558 | |
| 68 | S | H | -1.0867 | |
| 69 | R | H | -2.3369 | |
| 70 | A | H | -1.2945 | |
| 71 | F | H | 0.0000 | |
| 72 | Q | H | -1.9726 | |
| 74 | G | H | -1.4249 | |
| 75 | R | H | -1.0970 | |
| 76 | L | H | 0.0000 | |
| 77 | S | H | -0.7348 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.7745 | |
| 80 | R | H | -0.8985 | |
| 81 | D | H | -0.8172 | |
| 82 | T | H | -0.7940 | |
| 83 | S | H | -0.4927 | |
| 84 | A | H | -0.1917 | |
| 85 | S | H | -0.1064 | |
| 86 | T | H | 0.0000 | |
| 87 | T | H | 0.0000 | |
| 88 | Y | H | -0.4242 | |
| 89 | L | H | 0.0000 | |
| 90 | D | H | -1.0867 | |
| 91 | L | H | 0.0000 | |
| 92 | A | H | -0.8255 | |
| 93 | S | H | -0.7967 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -1.2865 | |
| 96 | S | H | -1.4850 | |
| 97 | E | H | -1.9848 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3821 | |
| 100 | A | H | 0.0000 | |
| 101 | I | H | 0.6663 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | -0.3814 | |
| 107 | G | H | 0.0000 | |
| 108 | S | H | -0.1443 | |
| 109 | T | H | -0.2054 | |
| 110 | R | H | -0.4813 | |
| 111 | W | H | 1.0192 | |
| 111A | L | H | 1.1887 | |
| 112A | Q | H | -0.2984 | |
| 112 | T | H | -0.2029 | |
| 113 | D | H | -0.2289 | |
| 114 | H | H | 0.0000 | |
| 115 | L | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | H | H | -0.8496 | |
| 118 | W | H | -0.5780 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.3985 | |
| 121 | G | H | -0.4778 | |
| 122 | T | H | 0.0000 | |
| 123 | L | H | 1.0440 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.1888 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8240 | |
| 128 | S | H | -0.7944 | |
| 1 | D | L | -2.3647 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.2399 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -1.2658 | |
| 6 | Q | L | 0.0000 | |
| 7 | T | L | -0.5523 | |
| 8 | P | L | -0.4249 | |
| 9 | S | L | -0.8011 | |
| 10 | S | L | -0.7878 | |
| 11 | L | L | -0.6347 | |
| 12 | S | L | -1.0593 | |
| 13 | A | L | 0.0000 | |
| 14 | A | L | -0.9015 | |
| 15 | V | L | -0.1994 | |
| 16 | G | L | -1.3908 | |
| 17 | D | L | -2.3057 | |
| 18 | R | L | -2.7329 | |
| 19 | V | L | 0.0000 | |
| 20 | S | L | -0.6698 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.6867 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.3643 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.9203 | |
| 27 | R | L | -2.4215 | |
| 28 | P | L | -1.9210 | |
| 29 | I | L | 0.0000 | |
| 36 | R | L | -2.6184 | |
| 37 | N | L | -1.8108 | |
| 38 | S | L | 0.0000 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | F | L | 0.0000 | |
| 43 | Q | L | -0.8555 | |
| 44 | Q | L | -1.2481 | |
| 45 | K | L | -1.6656 | |
| 46 | P | L | -1.1236 | |
| 47 | G | L | -1.4060 | |
| 48 | Q | L | -2.0859 | |
| 49 | A | L | -1.3535 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.2103 | |
| 52 | S | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.2774 | |
| 56 | G | L | -0.4612 | |
| 57 | T | L | 0.0000 | |
| 65 | S | L | -0.2441 | |
| 66 | T | L | 0.1293 | |
| 67 | L | L | 0.3044 | |
| 68 | H | L | -0.0953 | |
| 69 | S | L | -0.3460 | |
| 70 | G | L | -0.4940 | |
| 71 | V | L | -0.2534 | |
| 72 | P | L | -0.3286 | |
| 74 | S | L | -0.3704 | |
| 75 | K | L | -1.0668 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.2967 | |
| 78 | G | L | -0.2148 | |
| 79 | S | L | -0.6672 | |
| 80 | G | L | -1.2517 | |
| 83 | S | L | -1.5962 | |
| 84 | G | L | -1.8843 | |
| 85 | S | L | -1.9354 | |
| 86 | E | L | -2.0219 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.6260 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | N | L | -1.9877 | |
| 93 | N | L | -2.3356 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -1.1792 | |
| 96 | P | L | -0.8203 | |
| 97 | E | L | -1.4894 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.6972 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -1.0489 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | D | L | -0.7700 | |
| 109 | T | L | -0.3196 | |
| 114 | Y | L | -0.0965 | |
| 115 | P | L | 0.0000 | |
| 116 | I | L | 0.0000 | |
| 117 | T | L | -0.6834 | |
| 118 | F | L | -0.4635 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.7313 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | R | L | -1.6862 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.2068 | |
| 126 | T | L | -0.8493 | |
| 127 | K | L | -1.6999 |