| Chain sequence(s) |
A: SKGHKGH
C: SKGHKGH B: SKGHKGH E: SKGHKGH D: SKGHKGH G: SKGHKGH F: SKGHKGH I: SKGHKGH H: SKGHKGH K: SKGHKGH J: SKGHKGH M: SKGHKGH L: SKGHKGH O: SKGHKGH N: SKGHKGH Q: SKGHKGH P: SKGHKGH S: SKGHKGH R: SKGHKGH T: SKGHKGH input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:08:39)
[INFO] Main: Simulation completed successfully. (00:08:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -1.3892 | |
| 2 | K | A | -3.1648 | |
| 3 | G | A | 0.0000 | |
| 4 | H | A | -2.9214 | |
| 5 | K | A | -2.8417 | |
| 6 | G | A | -2.3412 | |
| 7 | H | A | -2.5823 | |
| 1 | S | B | -1.5963 | |
| 2 | K | B | -3.0184 | |
| 3 | G | B | -2.7177 | |
| 4 | H | B | -3.4491 | |
| 5 | K | B | -3.7084 | |
| 6 | G | B | 0.0000 | |
| 7 | H | B | -3.5564 | |
| 1 | S | C | -1.3405 | |
| 2 | K | C | -2.9759 | |
| 3 | G | C | -2.6266 | |
| 4 | H | C | -3.2331 | |
| 5 | K | C | -3.7951 | |
| 6 | G | C | -2.7574 | |
| 7 | H | C | -3.7219 | |
| 1 | S | D | -2.0300 | |
| 2 | K | D | -3.2498 | |
| 3 | G | D | -2.7670 | |
| 4 | H | D | -3.8148 | |
| 5 | K | D | -3.2348 | |
| 6 | G | D | -2.8376 | |
| 7 | H | D | -3.5707 | |
| 1 | S | E | -1.2006 | |
| 2 | K | E | -2.8923 | |
| 3 | G | E | -2.2848 | |
| 4 | H | E | -2.8562 | |
| 5 | K | E | -3.5257 | |
| 6 | G | E | -2.0996 | |
| 7 | H | E | -1.9365 | |
| 1 | S | F | -2.8081 | |
| 2 | K | F | -3.7211 | |
| 3 | G | F | -3.4288 | |
| 4 | H | F | -3.2701 | |
| 5 | K | F | -3.2150 | |
| 6 | G | F | -2.2230 | |
| 7 | H | F | -2.2253 | |
| 1 | S | G | -2.2475 | |
| 2 | K | G | -3.7461 | |
| 3 | G | G | 0.0000 | |
| 4 | H | G | 0.0000 | |
| 5 | K | G | -2.6113 | |
| 6 | G | G | -1.9316 | |
| 7 | H | G | -2.1382 | |
| 1 | S | H | -1.6232 | |
| 2 | K | H | -3.1984 | |
| 3 | G | H | -3.3513 | |
| 4 | H | H | -3.2531 | |
| 5 | K | H | -3.3910 | |
| 6 | G | H | -2.4132 | |
| 7 | H | H | -2.0651 | |
| 1 | S | I | -1.5307 | |
| 2 | K | I | -2.7841 | |
| 3 | G | I | -2.8972 | |
| 4 | H | I | -2.9388 | |
| 5 | K | I | -3.1419 | |
| 6 | G | I | -2.1745 | |
| 7 | H | I | -2.5999 | |
| 1 | S | J | -1.6361 | |
| 2 | K | J | -2.8333 | |
| 3 | G | J | -2.6627 | |
| 4 | H | J | -3.1107 | |
| 5 | K | J | -2.7522 | |
| 6 | G | J | -2.1884 | |
| 7 | H | J | -1.8232 | |
| 1 | S | K | -1.2994 | |
| 2 | K | K | -2.7161 | |
| 3 | G | K | -2.1904 | |
| 4 | H | K | -2.8761 | |
| 5 | K | K | -3.7817 | |
| 6 | G | K | -3.3524 | |
| 7 | H | K | -3.4133 | |
| 1 | S | L | -1.2355 | |
| 2 | K | L | -2.5708 | |
| 3 | G | L | -2.5915 | |
| 4 | H | L | -3.0522 | |
| 5 | K | L | -3.8081 | |
| 6 | G | L | -3.3697 | |
| 7 | H | L | -2.9897 | |
| 1 | S | M | -1.4595 | |
| 2 | K | M | -3.1776 | |
| 3 | G | M | -3.4066 | |
| 4 | H | M | -3.5826 | |
| 5 | K | M | -3.4888 | |
| 6 | G | M | -2.1082 | |
| 7 | H | M | -2.3846 | |
| 1 | S | N | -1.1791 | |
| 2 | K | N | -2.5540 | |
| 3 | G | N | -2.7453 | |
| 4 | H | N | -3.1012 | |
| 5 | K | N | -4.1973 | |
| 6 | G | N | -3.0883 | |
| 7 | H | N | -3.0359 | |
| 1 | S | O | -1.2879 | |
| 2 | K | O | -2.5175 | |
| 3 | G | O | -2.3093 | |
| 4 | H | O | -3.1974 | |
| 5 | K | O | -3.8943 | |
| 6 | G | O | -3.1315 | |
| 7 | H | O | -2.9660 | |
| 1 | S | P | -1.3287 | |
| 2 | K | P | -2.5199 | |
| 3 | G | P | -2.8129 | |
| 4 | H | P | -3.2885 | |
| 5 | K | P | -3.6839 | |
| 6 | G | P | -3.6637 | |
| 7 | H | P | -3.3810 | |
| 1 | S | Q | -1.2050 | |
| 2 | K | Q | -2.7608 | |
| 3 | G | Q | -3.4593 | |
| 4 | H | Q | -3.7817 | |
| 5 | K | Q | -4.2079 | |
| 6 | G | Q | -3.1598 | |
| 7 | H | Q | -2.5461 | |
| 1 | S | R | -1.2969 | |
| 2 | K | R | -2.5549 | |
| 3 | G | R | -2.4579 | |
| 4 | H | R | -2.8823 | |
| 5 | K | R | -3.3226 | |
| 6 | G | R | -2.5252 | |
| 7 | H | R | -2.3860 | |
| 1 | S | S | -2.6692 | |
| 2 | K | S | -3.2872 | |
| 3 | G | S | -3.0444 | |
| 4 | H | S | 0.0000 | |
| 5 | K | S | -3.8203 | |
| 6 | G | S | -2.6725 | |
| 7 | H | S | -2.6194 | |
| 1 | S | T | -1.3364 | |
| 2 | K | T | -2.7775 | |
| 3 | G | T | -2.7027 | |
| 4 | H | T | -3.4427 | |
| 5 | K | T | -3.6547 | |
| 6 | G | T | -2.9625 | |
| 7 | H | T | -2.0481 |