| Chain sequence(s) |
A: LPFGEVFNATRFASVYAWNRKRISNVADYSVLYNSASFSTFKYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPNGVEGFNYFPLQSYGFQPTNGVGYQPYRVVVLSFELQVQLQESGPGLVKPSETLSLTAVSGDSISSNYWSWIRQPPGKGLEWIGRFSGSGGSTDFNPSLKSRVTISTDTSKNQFSLNLRSVTAADTAVYYAKTYSGTFDYWGQGVLVTDIQMTQSPSSLSASVGDRVTITRASQDINNYLSWYQQKPGKAPKPLIYYASSLETGVPSRFSGSRSGTDYTLTISSLQLEDFATYYQQYNNSPYSFGQGTKVEI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:54)
[INFO] Main: Simulation completed successfully. (00:03:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.4229 | |
| 3 | P | A | -0.4367 | |
| 4 | F | A | 0.0000 | |
| 5 | G | A | -1.4870 | |
| 6 | E | A | -2.3312 | |
| 7 | V | A | -1.3473 | |
| 8 | F | A | 0.0000 | |
| 9 | N | A | -1.9748 | |
| 10 | A | A | -1.4387 | |
| 11 | T | A | -1.0324 | |
| 12 | R | A | -2.0793 | |
| 13 | F | A | -0.9597 | |
| 14 | A | A | -0.3846 | |
| 15 | S | A | 0.0000 | |
| 16 | V | A | 0.0000 | |
| 17 | Y | A | 0.0000 | |
| 18 | A | A | 0.0000 | |
| 19 | W | A | 0.0000 | |
| 20 | N | A | -0.9910 | |
| 21 | R | A | -1.3335 | |
| 22 | K | A | -2.2599 | |
| 23 | R | A | -2.4952 | |
| 24 | I | A | -0.9121 | |
| 25 | S | A | -0.9995 | |
| 26 | N | A | -0.7710 | |
| 28 | V | A | 0.9533 | |
| 29 | A | A | 0.2335 | |
| 30 | D | A | -0.9771 | |
| 31 | Y | A | 0.0000 | |
| 32 | S | A | -0.1468 | |
| 33 | V | A | 1.2419 | |
| 34 | L | A | 0.8135 | |
| 35 | Y | A | 0.8760 | |
| 36 | N | A | -0.0083 | |
| 37 | S | A | 0.2065 | |
| 38 | A | A | -0.0808 | |
| 39 | S | A | -0.3364 | |
| 40 | F | A | 0.1487 | |
| 41 | S | A | -0.1544 | |
| 42 | T | A | -0.4434 | |
| 43 | F | A | -0.2942 | |
| 44 | K | A | -1.2681 | |
| 46 | Y | A | -0.5094 | |
| 47 | G | A | -0.5133 | |
| 48 | V | A | -0.4323 | |
| 49 | S | A | -0.7493 | |
| 50 | P | A | -0.9136 | |
| 51 | T | A | -1.1783 | |
| 52 | K | A | -2.3592 | |
| 53 | L | A | 0.0000 | |
| 54 | N | A | -1.6229 | |
| 55 | D | A | -2.3685 | |
| 56 | L | A | -0.2281 | |
| 57 | C | A | 0.4967 | |
| 58 | F | A | 0.3385 | |
| 59 | T | A | -0.3869 | |
| 60 | N | A | -1.0220 | |
| 61 | V | A | 0.0000 | |
| 62 | Y | A | -0.7479 | |
| 63 | A | A | 0.0000 | |
| 64 | D | A | 0.0000 | |
| 65 | S | A | -0.3148 | |
| 66 | F | A | 0.0000 | |
| 67 | V | A | 0.0000 | |
| 68 | I | A | 0.0000 | |
| 69 | R | A | -0.4761 | |
| 70 | G | A | -0.6871 | |
| 71 | D | A | -1.7601 | |
| 72 | E | A | -1.8677 | |
| 73 | V | A | 0.0000 | |
| 74 | R | A | -2.5789 | |
| 75 | Q | A | -1.9314 | |
| 76 | I | A | 0.0000 | |
| 77 | A | A | -1.2280 | |
| 78 | P | A | -1.5845 | |
| 79 | G | A | -1.7137 | |
| 80 | Q | A | -1.5990 | |
| 81 | T | A | -1.0483 | |
| 82 | G | A | -1.1209 | |
| 83 | K | A | -1.4959 | |
| 84 | I | A | 0.0000 | |
| 85 | A | A | 0.0000 | |
| 86 | D | A | -1.5850 | |
| 87 | Y | A | -1.0867 | |
| 88 | N | A | 0.0000 | |
| 89 | Y | A | 0.0000 | |
| 90 | K | A | -1.3378 | |
| 91 | L | A | 0.0000 | |
| 92 | P | A | -1.9984 | |
| 93 | D | A | -2.9892 | |
| 94 | D | A | -2.7898 | |
| 95 | F | A | 0.0000 | |
| 96 | T | A | -1.0052 | |
| 97 | G | A | 0.0000 | |
| 99 | V | A | 0.0000 | |
| 100 | I | A | 0.0000 | |
| 101 | A | A | 0.0000 | |
| 102 | W | A | -0.1570 | |
| 103 | N | A | -0.5109 | |
| 104 | S | A | 0.0000 | |
| 105 | N | A | -0.8639 | |
| 106 | N | A | -1.4945 | |
| 107 | L | A | -0.6597 | |
| 108 | D | A | 0.0000 | |
| 109 | S | A | 0.0000 | |
| 110 | K | A | -1.1079 | |
| 111 | V | A | 0.4487 | |
| 112 | G | A | -0.1492 | |
| 113 | G | A | -0.4860 | |
| 114 | N | A | 0.0000 | |
| 115 | Y | A | 0.2791 | |
| 116 | N | A | -0.5398 | |
| 117 | Y | A | 0.0378 | |
| 118 | L | A | 0.1842 | |
| 119 | Y | A | 0.0958 | |
| 120 | R | A | 0.0000 | |
| 121 | L | A | 0.3171 | |
| 122 | F | A | -0.0236 | |
| 123 | R | A | -1.2243 | |
| 124 | K | A | -2.2707 | |
| 125 | S | A | -1.7203 | |
| 126 | N | A | -2.3884 | |
| 127 | L | A | 0.0000 | |
| 128 | K | A | -2.2398 | |
| 129 | P | A | -1.4972 | |
| 130 | F | A | -0.4709 | |
| 131 | E | A | -1.2209 | |
| 132 | R | A | -0.9137 | |
| 133 | D | A | -0.8064 | |
| 134 | I | A | 0.0000 | |
| 135 | S | A | -0.5604 | |
| 136 | T | A | -0.6418 | |
| 137 | E | A | -1.6457 | |
| 138 | I | A | -0.4536 | |
| 139 | Y | A | -0.6901 | |
| 140 | Q | A | -1.7114 | |
| 141 | A | A | -0.9663 | |
| 142 | G | A | -1.0816 | |
| 143 | S | A | -1.0195 | |
| 144 | T | A | -0.8371 | |
| 145 | P | A | -0.9026 | |
| 147 | N | A | -1.4247 | |
| 148 | G | A | -0.6272 | |
| 149 | V | A | 0.4283 | |
| 150 | E | A | -0.9037 | |
| 151 | G | A | -0.1121 | |
| 152 | F | A | 0.6249 | |
| 153 | N | A | -1.0902 | |
| 155 | Y | A | 0.4295 | |
| 156 | F | A | 0.4972 | |
| 157 | P | A | 0.0000 | |
| 158 | L | A | 0.4333 | |
| 159 | Q | A | -0.1694 | |
| 160 | S | A | 0.0036 | |
| 161 | Y | A | 0.1350 | |
| 162 | G | A | -0.1401 | |
| 163 | F | A | 0.0000 | |
| 164 | Q | A | -1.2523 | |
| 165 | P | A | -0.9323 | |
| 166 | T | A | -0.2251 | |
| 167 | N | A | -0.0287 | |
| 168 | G | A | 0.4959 | |
| 169 | V | A | 1.4563 | |
| 170 | G | A | 0.5048 | |
| 171 | Y | A | 0.8802 | |
| 172 | Q | A | -0.0444 | |
| 173 | P | A | 0.0000 | |
| 174 | Y | A | 0.0000 | |
| 175 | R | A | 0.0000 | |
| 176 | V | A | 0.0000 | |
| 177 | V | A | 0.0000 | |
| 178 | V | A | 0.0000 | |
| 179 | L | A | 0.0000 | |
| 180 | S | A | -0.3372 | |
| 181 | F | A | 0.0000 | |
| 182 | E | A | -1.0099 | |
| 183 | L | A | 0.6735 | |
| 184 | Q | A | -1.3006 | |
| 185 | V | A | -0.6447 | |
| 186 | Q | A | -1.1529 | |
| 187 | L | A | 0.0000 | |
| 188 | Q | A | -1.4268 | |
| 189 | E | A | -0.8406 | |
| 190 | S | A | -0.6754 | |
| 191 | G | A | -0.2829 | |
| 192 | P | A | 0.2160 | |
| 193 | G | A | 0.4416 | |
| 194 | L | A | 1.1967 | |
| 195 | V | A | -0.1212 | |
| 196 | K | A | -1.8716 | |
| 197 | P | A | -1.5918 | |
| 198 | S | A | -1.8524 | |
| 199 | E | A | -2.8164 | |
| 200 | T | A | -2.0652 | |
| 201 | L | A | -1.1757 | |
| 202 | S | A | -0.6504 | |
| 203 | L | A | 0.0000 | |
| 204 | T | A | -0.4919 | |
| 206 | A | A | -1.0562 | |
| 207 | V | A | 0.0000 | |
| 208 | S | A | -1.2422 | |
| 209 | G | A | -1.1645 | |
| 210 | D | A | -1.1926 | |
| 211 | S | A | -0.9288 | |
| 212 | I | A | 0.0000 | |
| 213 | S | A | -0.5215 | |
| 214 | S | A | -0.3553 | |
| 215 | N | A | 0.0000 | |
| 216 | Y | A | 0.7108 | |
| 217 | W | A | 0.0000 | |
| 218 | S | A | 0.0000 | |
| 219 | W | A | 0.0000 | |
| 220 | I | A | 0.0000 | |
| 221 | R | A | 0.0000 | |
| 222 | Q | A | -0.5451 | |
| 223 | P | A | -0.9174 | |
| 224 | P | A | -1.0405 | |
| 225 | G | A | -1.8075 | |
| 226 | K | A | -2.5738 | |
| 227 | G | A | -1.7622 | |
| 228 | L | A | 0.0000 | |
| 229 | E | A | -1.0568 | |
| 230 | W | A | 0.0000 | |
| 231 | I | A | 0.0000 | |
| 232 | G | A | 0.0000 | |
| 233 | R | A | -0.5177 | |
| 234 | F | A | 0.0000 | |
| 235 | S | A | 0.0000 | |
| 236 | G | A | 0.0000 | |
| 237 | S | A | -0.4343 | |
| 238 | G | A | -0.4037 | |
| 239 | G | A | -0.4740 | |
| 240 | S | A | -0.5437 | |
| 241 | T | A | -0.6631 | |
| 242 | D | A | -1.2608 | |
| 243 | F | A | -0.9275 | |
| 244 | N | A | 0.0000 | |
| 245 | P | A | -0.9538 | |
| 246 | S | A | -0.8061 | |
| 247 | L | A | -1.1381 | |
| 248 | K | A | -2.0027 | |
| 249 | S | A | -1.4675 | |
| 250 | R | A | -1.7733 | |
| 251 | V | A | -1.1246 | |
| 252 | T | A | -0.6921 | |
| 253 | I | A | -0.0986 | |
| 254 | S | A | -0.3823 | |
| 255 | T | A | -0.7674 | |
| 256 | D | A | -1.3492 | |
| 257 | T | A | -1.2770 | |
| 258 | S | A | -1.3604 | |
| 259 | K | A | -2.1868 | |
| 260 | N | A | -1.6375 | |
| 261 | Q | A | -1.3165 | |
| 262 | F | A | -0.4961 | |
| 263 | S | A | -0.3625 | |
| 264 | L | A | 0.0000 | |
| 265 | N | A | -0.8615 | |
| 266 | L | A | 0.0000 | |
| 267 | R | A | -2.5828 | |
| 268 | S | A | -2.1322 | |
| 269 | V | A | 0.0000 | |
| 270 | T | A | -0.9036 | |
| 271 | A | A | -0.2180 | |
| 272 | A | A | 0.0502 | |
| 273 | D | A | 0.0000 | |
| 274 | T | A | 0.0400 | |
| 275 | A | A | 0.0000 | |
| 276 | V | A | 0.9169 | |
| 277 | Y | A | 0.0000 | |
| 278 | Y | A | 0.0000 | |
| 280 | A | A | 0.0000 | |
| 281 | K | A | 0.0859 | |
| 282 | T | A | 0.0000 | |
| 283 | Y | A | 1.2456 | |
| 284 | S | A | 0.4728 | |
| 285 | G | A | 0.0000 | |
| 286 | T | A | 0.0000 | |
| 287 | F | A | 0.0000 | |
| 288 | D | A | -0.3930 | |
| 289 | Y | A | -0.0154 | |
| 290 | W | A | 0.0000 | |
| 291 | G | A | -1.2382 | |
| 292 | Q | A | -1.7993 | |
| 293 | G | A | -0.5375 | |
| 294 | V | A | 0.4211 | |
| 295 | L | A | 1.7883 | |
| 296 | V | A | 0.0000 | |
| 297 | T | A | 0.3315 | |
| 298 | D | A | -2.3222 | |
| 299 | I | A | 0.0000 | |
| 300 | Q | A | -2.2666 | |
| 301 | M | A | -1.7565 | |
| 302 | T | A | -1.2160 | |
| 303 | Q | A | -0.9655 | |
| 304 | S | A | -0.7314 | |
| 305 | P | A | -0.6360 | |
| 306 | S | A | -0.8816 | |
| 307 | S | A | -1.1878 | |
| 308 | L | A | -0.6547 | |
| 309 | S | A | -0.5607 | |
| 310 | A | A | -0.1229 | |
| 311 | S | A | 0.2841 | |
| 312 | V | A | 1.1250 | |
| 313 | G | A | -0.6156 | |
| 314 | D | A | -1.7780 | |
| 315 | R | A | -2.4524 | |
| 316 | V | A | 0.0000 | |
| 317 | T | A | -0.4839 | |
| 318 | I | A | 0.0000 | |
| 319 | T | A | -0.7241 | |
| 321 | R | A | -2.5089 | |
| 322 | A | A | -2.0218 | |
| 323 | S | A | -1.8770 | |
| 324 | Q | A | -2.6790 | |
| 325 | D | A | -2.8206 | |
| 326 | I | A | 0.0000 | |
| 327 | N | A | 0.0000 | |
| 328 | N | A | -0.6328 | |
| 329 | Y | A | -0.2109 | |
| 330 | L | A | 0.0000 | |
| 331 | S | A | 0.0000 | |
| 332 | W | A | 0.0000 | |
| 333 | Y | A | 0.0000 | |
| 334 | Q | A | 0.0000 | |
| 335 | Q | A | -1.5447 | |
| 336 | K | A | -2.1132 | |
| 337 | P | A | -1.5984 | |
| 338 | G | A | -1.7308 | |
| 339 | K | A | -2.6974 | |
| 340 | A | A | -1.8073 | |
| 341 | P | A | 0.0000 | |
| 342 | K | A | -1.5860 | |
| 343 | P | A | 0.0000 | |
| 344 | L | A | 0.0000 | |
| 345 | I | A | 0.0000 | |
| 346 | Y | A | 0.1722 | |
| 347 | Y | A | 0.0601 | |
| 348 | A | A | 0.0000 | |
| 349 | S | A | -0.2769 | |
| 350 | S | A | 0.0977 | |
| 351 | L | A | 0.2435 | |
| 352 | E | A | -0.4117 | |
| 353 | T | A | -0.3457 | |
| 354 | G | A | -0.5615 | |
| 355 | V | A | 0.0000 | |
| 356 | P | A | -0.5136 | |
| 357 | S | A | -0.5847 | |
| 358 | R | A | -1.0415 | |
| 359 | F | A | 0.0000 | |
| 360 | S | A | -0.4023 | |
| 361 | G | A | -0.3613 | |
| 362 | S | A | -0.7388 | |
| 363 | R | A | -1.1390 | |
| 364 | S | A | -0.9196 | |
| 365 | G | A | -1.2624 | |
| 366 | T | A | -1.5820 | |
| 367 | D | A | -1.6636 | |
| 368 | Y | A | 0.0000 | |
| 369 | T | A | -0.6921 | |
| 370 | L | A | 0.0000 | |
| 371 | T | A | -0.6588 | |
| 372 | I | A | 0.0000 | |
| 373 | S | A | -1.5353 | |
| 374 | S | A | -1.5045 | |
| 375 | L | A | 0.0000 | |
| 376 | Q | A | -0.7797 | |
| 377 | L | A | 0.6450 | |
| 378 | E | A | -1.4004 | |
| 379 | D | A | 0.0000 | |
| 380 | F | A | -0.4973 | |
| 381 | A | A | 0.0000 | |
| 382 | T | A | -1.1656 | |
| 383 | Y | A | 0.0000 | |
| 384 | Y | A | 0.0000 | |
| 386 | Q | A | 0.0000 | |
| 387 | Q | A | 0.0000 | |
| 388 | Y | A | 0.0000 | |
| 389 | N | A | -0.7360 | |
| 390 | N | A | -0.9437 | |
| 391 | S | A | -0.8392 | |
| 392 | P | A | -0.8162 | |
| 393 | Y | A | -0.4387 | |
| 394 | S | A | -0.8140 | |
| 395 | F | A | 0.0000 | |
| 396 | G | A | 0.0000 | |
| 397 | Q | A | -1.8530 | |
| 398 | G | A | -1.5180 | |
| 399 | T | A | 0.0000 | |
| 400 | K | A | -1.8827 | |
| 401 | V | A | 0.0000 | |
| 402 | E | A | -1.2709 | |
| 403 | I | A | 1.3229 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine