| Chain sequence(s) |
A: RRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQERAA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:20)
[INFO] Main: Simulation completed successfully. (00:02:20)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | R | A | -2.4291 | |
| 2 | R | A | -2.2661 | |
| 3 | I | A | -0.3028 | |
| 4 | R | A | -1.6041 | |
| 5 | T | A | -0.7377 | |
| 6 | T | A | -0.1445 | |
| 7 | F | A | -0.0371 | |
| 8 | T | A | -0.1629 | |
| 9 | S | A | -0.4681 | |
| 10 | A | A | -0.5028 | |
| 11 | Q | A | -1.0480 | |
| 12 | L | A | -0.6507 | |
| 13 | K | A | -1.9666 | |
| 14 | E | A | 0.0000 | |
| 15 | L | A | 0.0000 | |
| 16 | E | A | -1.8349 | |
| 17 | R | A | -2.0528 | |
| 18 | V | A | 0.0000 | |
| 19 | F | A | 0.0000 | |
| 20 | A | A | -1.3750 | |
| 21 | E | A | -2.0047 | |
| 22 | T | A | -0.9556 | |
| 23 | H | A | -0.4904 | |
| 24 | Y | A | 0.4073 | |
| 25 | P | A | 0.0000 | |
| 26 | D | A | -0.5837 | |
| 27 | I | A | 0.2413 | |
| 28 | Y | A | 0.2721 | |
| 29 | T | A | -0.4103 | |
| 30 | R | A | -1.1155 | |
| 31 | E | A | -1.6687 | |
| 32 | E | A | -2.1550 | |
| 33 | L | A | 0.0000 | |
| 34 | A | A | 0.0000 | |
| 35 | L | A | -0.8634 | |
| 36 | K | A | -2.1484 | |
| 37 | I | A | 0.0000 | |
| 38 | D | A | -1.8939 | |
| 39 | L | A | -1.0222 | |
| 40 | T | A | -0.8085 | |
| 41 | E | A | -0.8299 | |
| 42 | A | A | -0.4594 | |
| 43 | R | A | -0.7400 | |
| 44 | V | A | 0.0000 | |
| 45 | Q | A | -0.5950 | |
| 46 | V | A | 0.4385 | |
| 47 | W | A | -0.2972 | |
| 48 | F | A | 0.0000 | |
| 49 | Q | A | -1.4932 | |
| 50 | N | A | -1.6733 | |
| 51 | R | A | -2.1298 | |
| 52 | R | A | -2.0663 | |
| 53 | A | A | -2.7336 | |
| 54 | K | A | -3.8310 | |
| 55 | F | A | -3.3668 | |
| 56 | R | A | -4.5504 | |
| 57 | K | A | -4.8392 | |
| 58 | Q | A | -4.3376 | |
| 59 | E | A | -4.4840 | |
| 60 | R | A | -4.0185 | |
| 61 | A | A | -2.4389 | |
| 62 | A | A | -1.6247 |