Chain sequence(s) |
A: GFKDLLKGAAKALVKTVLFFSKKD
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:07) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:07) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:07) [INFO] runJob: Creating pdb object from: input.pdb (00:00:07) [INFO] FoldX: Starting FoldX energy minimalization (00:00:07) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:37) [INFO] Main: Simulation completed successfully. (00:00:37) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | G | A | -0.4221 | |
2 | F | A | 0.8298 | |
3 | K | A | -1.5315 | |
4 | D | A | -1.8183 | |
5 | L | A | 0.2661 | |
6 | L | A | -0.3758 | |
7 | K | A | -2.0734 | |
8 | G | A | -1.1023 | |
9 | A | A | -0.3163 | |
10 | A | A | -0.2850 | |
11 | K | A | -0.9161 | |
12 | A | A | 0.3365 | |
13 | L | A | 2.1654 | |
14 | V | A | 2.8089 | |
15 | K | A | 1.5065 | |
16 | T | A | 2.6008 | |
17 | V | A | 3.6849 | |
18 | L | A | 3.0212 | |
19 | F | A | 2.4539 | |
20 | F | A | 2.0638 | |
21 | S | A | 0.0643 | |
22 | K | A | -1.6081 | |
23 | K | A | -2.2992 | |
24 | D | A | -2.6193 |