| Chain sequence(s) |
A: AALEAYKTALAAVKAAAAAFLAEVKRDLGDSPEVQAMLALAAQLDATTDAMVAALDAREWARARALAAEVAALVAQLVAQADAIVGRLSAAAQAAYAALVAARAATAAALAALEAAIAAL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:02)
[INFO] Main: Simulation completed successfully. (00:01:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.5407 | |
| 2 | A | A | -0.5088 | |
| 3 | L | A | -1.0474 | |
| 4 | E | A | -2.0865 | |
| 5 | A | A | -0.9040 | |
| 6 | Y | A | 0.0000 | |
| 7 | K | A | -1.2255 | |
| 8 | T | A | -0.7714 | |
| 9 | A | A | -0.5433 | |
| 10 | L | A | 0.0000 | |
| 11 | A | A | -0.1312 | |
| 12 | A | A | -0.1661 | |
| 13 | V | A | -0.1456 | |
| 14 | K | A | -0.5334 | |
| 15 | A | A | 0.0663 | |
| 16 | A | A | 0.1208 | |
| 17 | A | A | 0.0343 | |
| 18 | A | A | 0.1258 | |
| 19 | A | A | -0.0333 | |
| 20 | F | A | 0.0000 | |
| 21 | L | A | -0.4178 | |
| 22 | A | A | -0.9052 | |
| 23 | E | A | -1.4630 | |
| 24 | V | A | 0.0000 | |
| 25 | K | A | -2.6700 | |
| 26 | R | A | -2.8826 | |
| 27 | D | A | -2.1602 | |
| 28 | L | A | -1.7522 | |
| 29 | G | A | -2.2963 | |
| 30 | D | A | -2.7946 | |
| 31 | S | A | -1.6880 | |
| 32 | P | A | -1.2843 | |
| 33 | E | A | -1.3019 | |
| 34 | V | A | 0.0000 | |
| 35 | Q | A | -1.8779 | |
| 36 | A | A | -0.7930 | |
| 37 | M | A | 0.0000 | |
| 38 | L | A | -0.4029 | |
| 39 | A | A | -0.2626 | |
| 40 | L | A | -0.4457 | |
| 41 | A | A | -0.4318 | |
| 42 | A | A | -0.7600 | |
| 43 | Q | A | -1.5158 | |
| 44 | L | A | 0.0000 | |
| 45 | D | A | -2.0312 | |
| 46 | A | A | -1.5167 | |
| 47 | T | A | -1.4645 | |
| 48 | T | A | 0.0000 | |
| 49 | D | A | -2.0749 | |
| 50 | A | A | -1.2567 | |
| 51 | M | A | 0.0000 | |
| 52 | V | A | -1.1974 | |
| 53 | A | A | -1.5319 | |
| 54 | A | A | 0.0000 | |
| 55 | L | A | 0.0000 | |
| 56 | D | A | -2.7037 | |
| 57 | A | A | -2.1470 | |
| 58 | R | A | -3.2003 | |
| 59 | E | A | -3.3539 | |
| 60 | W | A | -2.0401 | |
| 61 | A | A | -1.5542 | |
| 62 | R | A | -2.4714 | |
| 63 | A | A | 0.0000 | |
| 64 | R | A | -1.7410 | |
| 65 | A | A | -1.2163 | |
| 66 | L | A | 0.0000 | |
| 67 | A | A | -0.8494 | |
| 68 | A | A | -0.9811 | |
| 69 | E | A | -1.5688 | |
| 70 | V | A | -0.9904 | |
| 71 | A | A | -0.2848 | |
| 72 | A | A | -0.4128 | |
| 73 | L | A | -0.4602 | |
| 74 | V | A | 0.0009 | |
| 75 | A | A | -0.2112 | |
| 76 | Q | A | -0.9351 | |
| 77 | L | A | -0.1993 | |
| 78 | V | A | -0.1235 | |
| 79 | A | A | -0.7624 | |
| 80 | Q | A | -0.9122 | |
| 81 | A | A | 0.0000 | |
| 82 | D | A | -2.0736 | |
| 83 | A | A | -1.1668 | |
| 84 | I | A | 0.0000 | |
| 85 | V | A | -1.3300 | |
| 86 | G | A | -1.6240 | |
| 87 | R | A | -2.2173 | |
| 88 | L | A | -1.4426 | |
| 89 | S | A | -0.9170 | |
| 90 | A | A | -0.4008 | |
| 91 | A | A | -0.2336 | |
| 92 | A | A | 0.0000 | |
| 93 | Q | A | -0.9910 | |
| 94 | A | A | -0.0630 | |
| 95 | A | A | 0.0428 | |
| 96 | Y | A | 0.0000 | |
| 97 | A | A | 0.2345 | |
| 98 | A | A | 0.2644 | |
| 99 | L | A | 0.3116 | |
| 100 | V | A | 0.7278 | |
| 101 | A | A | 0.2400 | |
| 102 | A | A | -0.1443 | |
| 103 | R | A | -0.8161 | |
| 104 | A | A | -0.1918 | |
| 105 | A | A | -0.0663 | |
| 106 | T | A | 0.0000 | |
| 107 | A | A | -0.1089 | |
| 108 | A | A | -0.0119 | |
| 109 | A | A | -0.2456 | |
| 110 | L | A | 0.1872 | |
| 111 | A | A | 0.0658 | |
| 112 | A | A | 0.0803 | |
| 113 | L | A | 0.0000 | |
| 114 | E | A | -0.4884 | |
| 115 | A | A | 0.1056 | |
| 116 | A | A | 0.4067 | |
| 117 | I | A | 0.4579 | |
| 118 | A | A | 0.5791 | |
| 119 | A | A | 0.8301 | |
| 120 | L | A | 1.6785 |