| Chain sequence(s) |
A: SCNNSCQSHSDCASHCICTFRGCGAVN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:08)
[INFO] Main: Simulation completed successfully. (00:00:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -0.7385 | |
| 2 | C | A | -0.9984 | |
| 3 | N | A | -2.3053 | |
| 4 | N | A | -2.3189 | |
| 5 | S | A | -1.6092 | |
| 6 | C | A | -1.5482 | |
| 7 | Q | A | -1.8075 | |
| 8 | S | A | -1.4265 | |
| 9 | H | A | -1.4301 | |
| 10 | S | A | -1.2906 | |
| 11 | D | A | -1.7838 | |
| 12 | C | A | -1.3539 | |
| 13 | A | A | -0.8708 | |
| 14 | S | A | -0.7814 | |
| 15 | H | A | -0.7322 | |
| 16 | C | A | 0.0000 | |
| 17 | I | A | 0.6145 | |
| 18 | C | A | 0.1485 | |
| 19 | T | A | 0.6309 | |
| 20 | F | A | 1.1421 | |
| 21 | R | A | -1.3151 | |
| 22 | G | A | -1.1932 | |
| 23 | C | A | 0.0000 | |
| 24 | G | A | -0.3458 | |
| 25 | A | A | 0.2973 | |
| 26 | V | A | 1.2786 | |
| 27 | N | A | -0.4513 |