Chain sequence(s) |
H: QVQLQASGGGLVQAGGSLRLSCAASGRTFSSYAMGWFRQAPGKQREFVAAISWSGDRTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYHCAANDLMVPELLMPRVESYDYWGQGTQVTVSS
input PDB |
Selected Chain(s) | H |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:22) [INFO] Main: Simulation completed successfully. (00:01:25) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -2.0627 | |
2 | V | H | 0.0000 | |
3 | Q | H | -1.9536 | |
4 | L | H | 0.0000 | |
5 | Q | H | -1.8045 | |
6 | A | H | 0.0000 | |
7 | S | H | -1.1564 | |
8 | G | H | -1.0954 | |
9 | G | H | -0.6211 | |
11 | G | H | 0.0484 | |
12 | L | H | 1.1537 | |
13 | V | H | 0.0396 | |
14 | Q | H | -1.2832 | |
15 | A | H | -1.5071 | |
16 | G | H | -1.3652 | |
17 | G | H | -0.9357 | |
18 | S | H | -1.2205 | |
19 | L | H | -0.8364 | |
20 | R | H | -2.0971 | |
21 | L | H | 0.0000 | |
22 | S | H | -0.8372 | |
23 | C | H | 0.0000 | |
24 | A | H | -1.1603 | |
25 | A | H | 0.0000 | |
26 | S | H | -1.5885 | |
27 | G | H | -1.9967 | |
28 | R | H | -2.3445 | |
29 | T | H | -1.1803 | |
30 | F | H | 0.0000 | |
35 | S | H | -0.8569 | |
36 | S | H | -0.5490 | |
37 | Y | H | 0.0318 | |
38 | A | H | -0.0296 | |
39 | M | H | 0.0000 | |
40 | G | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | F | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -1.5690 | |
45 | A | H | -1.5704 | |
46 | P | H | -1.1692 | |
47 | G | H | -1.7915 | |
48 | K | H | -2.9163 | |
49 | Q | H | -2.6541 | |
50 | R | H | -1.7107 | |
51 | E | H | -1.1192 | |
52 | F | H | -0.4269 | |
53 | V | H | 0.0000 | |
54 | A | H | 0.0000 | |
55 | A | H | 0.0000 | |
56 | I | H | 0.0000 | |
57 | S | H | 0.0000 | |
58 | W | H | -0.2282 | |
59 | S | H | -0.8711 | |
62 | G | H | -1.4155 | |
63 | D | H | -2.2756 | |
64 | R | H | -1.4385 | |
65 | T | H | -0.5281 | |
66 | Y | H | 0.1428 | |
67 | Y | H | -0.7591 | |
68 | A | H | -1.2446 | |
69 | D | H | -2.5272 | |
70 | S | H | -1.8014 | |
71 | V | H | 0.0000 | |
72 | K | H | -2.6744 | |
74 | G | H | -1.8144 | |
75 | R | H | -1.6069 | |
76 | F | H | 0.0000 | |
77 | T | H | -0.8603 | |
78 | I | H | 0.0000 | |
79 | S | H | -0.6037 | |
80 | R | H | -0.9738 | |
81 | D | H | -1.2846 | |
82 | N | H | -1.4213 | |
83 | A | H | -1.2469 | |
84 | K | H | -2.1642 | |
85 | N | H | -1.8539 | |
86 | T | H | 0.0000 | |
87 | V | H | 0.0000 | |
88 | Y | H | -0.5266 | |
89 | L | H | 0.0000 | |
90 | Q | H | -1.2699 | |
91 | M | H | 0.0000 | |
92 | N | H | -1.4191 | |
93 | S | H | -1.2444 | |
94 | L | H | 0.0000 | |
95 | K | H | -2.5060 | |
96 | P | H | -1.9519 | |
97 | E | H | -2.3949 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.8147 | |
100 | A | H | 0.0000 | |
101 | V | H | -0.2131 | |
102 | Y | H | 0.0000 | |
103 | H | H | -0.6032 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | A | H | 0.0000 | |
107 | N | H | -1.1330 | |
108 | D | H | -1.7791 | |
109 | L | H | -0.1857 | |
110 | M | H | 0.8664 | |
111 | V | H | 0.7164 | |
111A | P | H | 0.0069 | |
111B | E | H | -0.2315 | |
111C | L | H | 1.3960 | |
112D | L | H | 1.4596 | |
112C | M | H | 0.9974 | |
112B | P | H | 0.0105 | |
112A | R | H | -1.4207 | |
112 | V | H | -0.7705 | |
113 | E | H | -2.2241 | |
114 | S | H | -1.5117 | |
115 | Y | H | 0.0000 | |
116 | D | H | -2.3169 | |
117 | Y | H | -1.2249 | |
118 | W | H | -0.6275 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.5635 | |
121 | G | H | -0.9451 | |
122 | T | H | -0.8442 | |
123 | Q | H | -0.5443 | |
124 | V | H | 0.0000 | |
125 | T | H | -0.1625 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.8046 | |
128 | S | H | -0.9167 |