| Chain sequence(s) |
A: GPLPLNPEPALRPTSDYVTPTDLYYYAETDLLTFEGDPTKDIVENGKVVVPQVSAYQYRVYLLKLPDPNKLPLPSDDFLNPATERRIWQLEAFYIGVFGPLGKGEYGHPNFNRLGDVDNPTVPVHESADDTVNYSFRPVLRQEYIIGDEPPIGKYTDIAPPEPGLPPGAIPPLKEVSDLIQHGDMADIGFGAKDYAKLEPTKDNVPDIILNTKTKVFDYDGMRAEPYGRRLFTYGRKEKSYDSATYVRDGPDLVPLPSAPPPSPLYVPPPPGSPYWTPPPYDFFTIPDEGEITEADLLFNKPIFITKTPGLNQGVLWYNRLYVTVLDNRRAEIEEKKTRTSTPLIDVYDPSNYKTSKTYKEEYKLSLIIRLCIIPLTPDTLAEIARLDPRILEDWELPDIPPVERPDPYAGLKFIEIDLTDKLSSNLSASWLGRLYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2106 | |
| 2 | P | A | 0.4225 | |
| 3 | L | A | 1.3955 | |
| 4 | P | A | 0.7078 | |
| 5 | L | A | 0.8795 | |
| 6 | N | A | -1.0100 | |
| 7 | P | A | -1.4390 | |
| 8 | E | A | -2.0875 | |
| 9 | P | A | -1.2919 | |
| 10 | A | A | -0.4461 | |
| 11 | L | A | -0.0940 | |
| 12 | R | A | -0.7393 | |
| 13 | P | A | -0.7183 | |
| 14 | T | A | 0.0000 | |
| 15 | S | A | -1.2104 | |
| 16 | D | A | -2.0358 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.4239 | |
| 20 | P | A | -0.5780 | |
| 21 | T | A | -0.5962 | |
| 22 | D | A | -1.6405 | |
| 23 | L | A | -0.4840 | |
| 24 | Y | A | -0.2302 | |
| 25 | Y | A | 0.0027 | |
| 26 | Y | A | -0.2080 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -0.7869 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.2794 | |
| 31 | L | A | 0.4899 | |
| 32 | L | A | 0.3631 | |
| 33 | T | A | -0.3917 | |
| 34 | F | A | -1.0491 | |
| 35 | E | A | -2.1947 | |
| 36 | G | A | 0.0000 | |
| 37 | D | A | -1.8069 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.4931 | |
| 40 | K | A | -1.9345 | |
| 41 | D | A | -0.9860 | |
| 42 | I | A | 0.6575 | |
| 43 | V | A | 0.7132 | |
| 44 | E | A | -1.4808 | |
| 45 | N | A | -2.1057 | |
| 46 | G | A | -1.4138 | |
| 47 | K | A | -1.1812 | |
| 48 | V | A | 1.1225 | |
| 49 | V | A | 1.5654 | |
| 50 | V | A | 0.8664 | |
| 51 | P | A | -0.1368 | |
| 52 | Q | A | -1.1604 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | Y | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | Y | A | 0.0000 | |
| 62 | L | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -1.8744 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.2063 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3000 | |
| 70 | K | A | -1.9006 | |
| 71 | L | A | -0.8187 | |
| 72 | P | A | -0.7491 | |
| 73 | L | A | -0.5057 | |
| 74 | P | A | -0.6062 | |
| 75 | S | A | -1.1737 | |
| 76 | D | A | -2.2670 | |
| 77 | D | A | -1.9051 | |
| 78 | F | A | 0.1397 | |
| 79 | L | A | -0.5178 | |
| 80 | N | A | -1.3700 | |
| 81 | P | A | -0.7289 | |
| 82 | A | A | -0.5732 | |
| 83 | T | A | -0.6133 | |
| 84 | E | A | -0.6265 | |
| 85 | R | A | -0.5606 | |
| 86 | R | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | Q | A | -0.2953 | |
| 90 | L | A | 0.0000 | |
| 91 | E | A | -0.2625 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | Y | A | -0.2878 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | 0.0000 | |
| 97 | V | A | 0.0000 | |
| 98 | F | A | 0.4280 | |
| 99 | G | A | -0.4885 | |
| 100 | P | A | -0.4913 | |
| 101 | L | A | -0.5557 | |
| 102 | G | A | -1.1168 | |
| 103 | K | A | -2.2763 | |
| 104 | G | A | 0.0000 | |
| 105 | E | A | -2.4864 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -1.2539 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -1.4551 | |
| 110 | N | A | -2.3087 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | R | A | -0.6240 | |
| 114 | L | A | -0.9372 | |
| 115 | G | A | -0.5485 | |
| 116 | D | A | -0.8912 | |
| 117 | V | A | -0.5788 | |
| 118 | D | A | -2.4475 | |
| 119 | N | A | -2.0384 | |
| 120 | P | A | -0.8026 | |
| 121 | T | A | 0.0573 | |
| 122 | V | A | 1.2932 | |
| 123 | P | A | 0.3870 | |
| 124 | V | A | -0.2298 | |
| 125 | H | A | -1.5848 | |
| 126 | E | A | -2.7781 | |
| 127 | S | A | -1.9370 | |
| 128 | A | A | -1.3993 | |
| 129 | D | A | -2.4296 | |
| 130 | D | A | -1.9423 | |
| 131 | T | A | -1.4419 | |
| 132 | V | A | -0.9734 | |
| 133 | N | A | -1.5269 | |
| 134 | Y | A | -0.7235 | |
| 135 | S | A | -0.9351 | |
| 136 | F | A | 0.0000 | |
| 137 | R | A | -1.4078 | |
| 138 | P | A | 0.0000 | |
| 139 | V | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | R | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | E | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | E | A | -0.1650 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | I | A | -0.2841 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -1.0955 | |
| 155 | Y | A | 0.0000 | |
| 156 | T | A | -0.9156 | |
| 157 | D | A | 0.0000 | |
| 158 | I | A | 0.3594 | |
| 159 | A | A | -0.1941 | |
| 160 | P | A | -0.6279 | |
| 161 | P | A | -0.7449 | |
| 162 | E | A | -2.0579 | |
| 163 | P | A | -1.2712 | |
| 164 | G | A | -0.8024 | |
| 165 | L | A | -0.0054 | |
| 166 | P | A | -0.0185 | |
| 167 | P | A | -0.2072 | |
| 168 | G | A | 0.1725 | |
| 169 | A | A | 0.9914 | |
| 170 | I | A | 2.3626 | |
| 171 | P | A | 1.0135 | |
| 172 | P | A | 0.7669 | |
| 173 | L | A | 1.1206 | |
| 174 | K | A | -0.9044 | |
| 175 | E | A | -2.0119 | |
| 176 | V | A | -1.1151 | |
| 177 | S | A | -1.0443 | |
| 178 | D | A | -0.9308 | |
| 179 | L | A | -0.2085 | |
| 180 | I | A | 0.0000 | |
| 181 | Q | A | -0.8130 | |
| 182 | H | A | -0.8049 | |
| 183 | G | A | -0.6851 | |
| 184 | D | A | -0.8222 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | -0.3938 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.3585 | |
| 190 | F | A | -0.0580 | |
| 191 | G | A | -0.2665 | |
| 192 | A | A | -0.7915 | |
| 193 | K | A | -1.2765 | |
| 194 | D | A | 0.0000 | |
| 195 | Y | A | 0.0000 | |
| 196 | A | A | -1.9025 | |
| 197 | K | A | -2.1433 | |
| 198 | L | A | -1.0101 | |
| 199 | E | A | -1.5603 | |
| 200 | P | A | -1.4238 | |
| 201 | T | A | -1.2329 | |
| 202 | K | A | -2.4290 | |
| 203 | D | A | -1.7019 | |
| 204 | N | A | -1.1733 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.7637 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -1.5168 | |
| 211 | N | A | -2.0697 | |
| 212 | T | A | -1.4634 | |
| 213 | K | A | -1.6555 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | V | A | -0.0862 | |
| 217 | F | A | 0.0000 | |
| 218 | D | A | -1.0617 | |
| 219 | Y | A | -1.3373 | |
| 220 | D | A | -2.5286 | |
| 221 | G | A | -1.7654 | |
| 222 | M | A | 0.0000 | |
| 223 | R | A | -2.7345 | |
| 224 | A | A | -1.6250 | |
| 225 | E | A | -1.3254 | |
| 226 | P | A | -0.5996 | |
| 227 | Y | A | -0.2622 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.5170 | |
| 231 | L | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.0040 | |
| 234 | Y | A | 0.1837 | |
| 235 | G | A | -0.5447 | |
| 236 | R | A | -1.7608 | |
| 237 | K | A | -2.2940 | |
| 238 | E | A | -2.5298 | |
| 239 | K | A | -2.4411 | |
| 240 | S | A | -1.5169 | |
| 241 | Y | A | -0.5912 | |
| 242 | D | A | -1.5195 | |
| 243 | S | A | -1.1053 | |
| 244 | A | A | -1.1004 | |
| 245 | T | A | -0.7109 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | 0.0000 | |
| 249 | D | A | -1.5466 | |
| 250 | G | A | -1.0815 | |
| 251 | P | A | -0.3497 | |
| 252 | D | A | 0.4903 | |
| 253 | L | A | 2.1133 | |
| 254 | V | A | 2.2809 | |
| 255 | P | A | 0.9959 | |
| 256 | L | A | 1.0220 | |
| 257 | P | A | 0.3065 | |
| 258 | S | A | -0.1897 | |
| 259 | A | A | 0.1259 | |
| 260 | P | A | -0.2913 | |
| 261 | P | A | -0.1549 | |
| 262 | P | A | 0.1072 | |
| 263 | S | A | 0.6315 | |
| 264 | P | A | 0.7500 | |
| 265 | L | A | 1.9258 | |
| 266 | Y | A | 1.7590 | |
| 267 | V | A | 1.9754 | |
| 268 | P | A | 1.0909 | |
| 269 | P | A | 0.5610 | |
| 270 | P | A | -0.0381 | |
| 271 | P | A | -0.3315 | |
| 272 | G | A | -0.3775 | |
| 273 | S | A | 0.1049 | |
| 274 | P | A | 0.1125 | |
| 275 | Y | A | 1.0089 | |
| 276 | W | A | 0.8670 | |
| 277 | T | A | 0.4425 | |
| 278 | P | A | 0.4335 | |
| 279 | P | A | -0.5431 | |
| 280 | P | A | -0.6870 | |
| 281 | Y | A | 0.0493 | |
| 282 | D | A | -0.5464 | |
| 283 | F | A | 1.2669 | |
| 284 | F | A | 0.6091 | |
| 285 | T | A | -0.0921 | |
| 286 | I | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | 0.0000 | |
| 289 | E | A | 0.0000 | |
| 290 | G | A | -1.4637 | |
| 291 | E | A | -2.0578 | |
| 292 | I | A | -1.4938 | |
| 293 | T | A | -1.4978 | |
| 294 | E | A | -2.0691 | |
| 295 | A | A | -1.4606 | |
| 296 | D | A | -1.9229 | |
| 297 | L | A | -1.3027 | |
| 298 | L | A | -1.0569 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.0520 | |
| 301 | K | A | -1.5911 | |
| 302 | P | A | -0.4588 | |
| 303 | I | A | 0.1026 | |
| 304 | F | A | 0.0606 | |
| 305 | I | A | 0.0000 | |
| 306 | T | A | -0.8066 | |
| 307 | K | A | -1.7673 | |
| 308 | T | A | 0.0000 | |
| 309 | P | A | -0.9948 | |
| 310 | G | A | -0.7860 | |
| 311 | L | A | -0.3264 | |
| 312 | N | A | 0.0000 | |
| 313 | Q | A | -0.8622 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | Y | A | -0.4584 | |
| 319 | N | A | -0.5248 | |
| 320 | R | A | 0.0000 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | R | A | 0.0000 | |
| 330 | R | A | -0.9104 | |
| 331 | A | A | 0.0000 | |
| 332 | E | A | -3.0490 | |
| 333 | I | A | -3.0318 | |
| 334 | E | A | -3.9233 | |
| 335 | E | A | -4.5615 | |
| 336 | K | A | -4.4520 | |
| 337 | K | A | -4.0018 | |
| 338 | T | A | -2.7374 | |
| 339 | R | A | -1.9990 | |
| 340 | T | A | -1.4228 | |
| 341 | S | A | -0.3738 | |
| 342 | T | A | -0.0490 | |
| 343 | P | A | 0.1651 | |
| 344 | L | A | 1.2113 | |
| 345 | I | A | 0.8084 | |
| 346 | D | A | -0.1263 | |
| 347 | V | A | 1.6293 | |
| 348 | Y | A | 1.3625 | |
| 349 | D | A | -0.1198 | |
| 350 | P | A | -0.8696 | |
| 351 | S | A | -0.9490 | |
| 352 | N | A | -1.0533 | |
| 353 | Y | A | -2.0505 | |
| 354 | K | A | -2.9272 | |
| 355 | T | A | -3.0037 | |
| 356 | S | A | -2.9576 | |
| 357 | K | A | -3.1252 | |
| 358 | T | A | -2.7873 | |
| 359 | Y | A | 0.0000 | |
| 360 | K | A | -2.3664 | |
| 361 | E | A | 0.0000 | |
| 362 | E | A | -0.2467 | |
| 363 | Y | A | 0.0000 | |
| 364 | K | A | -0.3670 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | I | A | 0.0000 | |
| 370 | R | A | -0.4302 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | I | A | 0.2717 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.4786 | |
| 376 | L | A | -0.4076 | |
| 377 | T | A | -0.6616 | |
| 378 | P | A | -0.9893 | |
| 379 | D | A | -1.7817 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -0.3921 | |
| 382 | A | A | -0.6939 | |
| 383 | E | A | 0.0000 | |
| 384 | I | A | 0.0000 | |
| 385 | A | A | -0.6279 | |
| 386 | R | A | -0.7864 | |
| 387 | L | A | -0.2810 | |
| 388 | D | A | 0.0000 | |
| 389 | P | A | -0.7818 | |
| 390 | R | A | -1.4867 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | E | A | -2.1528 | |
| 394 | D | A | -2.5498 | |
| 395 | W | A | -1.8511 | |
| 396 | E | A | -2.5762 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | -1.4676 | |
| 399 | D | A | -2.0291 | |
| 400 | I | A | -0.9990 | |
| 401 | P | A | -0.9535 | |
| 402 | P | A | -1.2694 | |
| 403 | V | A | -0.4617 | |
| 404 | E | A | -2.4937 | |
| 405 | R | A | -2.8179 | |
| 406 | P | A | -2.0641 | |
| 407 | D | A | -2.2570 | |
| 408 | P | A | -1.1840 | |
| 409 | Y | A | 0.0000 | |
| 410 | A | A | -0.8691 | |
| 411 | G | A | -0.8133 | |
| 412 | L | A | -0.6492 | |
| 413 | K | A | -1.8699 | |
| 414 | F | A | -1.0824 | |
| 415 | I | A | -1.1139 | |
| 416 | E | A | -2.3353 | |
| 417 | I | A | -1.8772 | |
| 418 | D | A | -2.8296 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8419 | |
| 421 | D | A | -2.3718 | |
| 422 | K | A | -1.9335 | |
| 423 | L | A | -0.7760 | |
| 424 | S | A | -0.7507 | |
| 425 | S | A | -0.5787 | |
| 426 | N | A | -1.4267 | |
| 427 | L | A | 0.0000 | |
| 428 | S | A | -0.6328 | |
| 429 | A | A | -0.5156 | |
| 430 | S | A | 0.0000 | |
| 431 | W | A | 0.4175 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -0.9627 | |
| 435 | L | A | -0.2950 | |
| 436 | Y | A | -0.1054 | |
| 437 | L | A | 0.1014 | |
| 438 | N | A | -1.5592 | |
| 439 | R | A | -1.9049 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine