Project name: Nb_E

Status: done

Started: 2025-07-21 16:55:38
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Chain sequence(s) A: QVQLVESGGGLVQPGGSLRLSCAASGGSDFDFSNYSLGWFRQAPGQGLEAVAAINPLGQYTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAANENIPRNMFNPSDYQYWGQGTLVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:39)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:40)
Show buried residues

Minimal score value
-2.9205
Maximal score value
1.7318
Average score
-0.6012
Total score value
-76.9503

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.7330
2 V A -1.4112
3 Q A -1.0664
4 L A 0.0000
5 V A 0.8451
6 E A 0.3291
7 S A -0.1965
8 G A -0.7062
9 G A 0.1281
10 G A 0.7308
11 L A 1.4523
12 V A -0.0419
13 Q A -1.3802
14 P A -1.8161
15 G A -1.5563
16 G A -1.0440
17 S A -1.3150
18 L A -0.9040
19 R A -2.1380
20 L A 0.0000
21 S A -0.4576
22 C A 0.0000
23 A A -0.2586
24 A A 0.0000
25 S A -1.0190
26 G A -1.6280
27 G A -1.7467
28 S A -1.5946
29 D A -2.3734
30 F A -2.0438
31 D A -2.5085
32 F A 0.0000
33 S A -1.4501
34 N A -1.9200
35 Y A 0.0000
36 S A 0.0000
37 L A 0.0000
38 G A 0.0000
39 W A 0.0000
40 F A 0.0000
41 R A 0.0000
42 Q A -0.6422
43 A A -0.9522
44 P A -0.9759
45 G A -1.2585
46 Q A -1.7943
47 G A -1.1332
48 L A -0.2885
49 E A -0.5853
50 A A 0.3325
51 V A 0.0000
52 A A 0.0000
53 A A 0.0000
54 I A 0.0000
55 N A 0.0000
56 P A 0.0242
57 L A 0.9655
58 G A 0.0819
59 Q A -0.1607
60 Y A 0.9838
61 T A 0.4223
62 Y A 0.5332
63 Y A -0.4788
64 A A -1.0730
65 D A -2.4733
66 S A -1.7891
67 V A 0.0000
68 K A -2.6013
69 G A -1.7571
70 R A -1.5265
71 F A 0.0000
72 T A -0.8217
73 I A 0.0000
74 S A -0.5348
75 R A -1.0766
76 D A -2.0723
77 N A -2.2577
78 S A -1.8525
79 K A -2.6139
80 N A -2.2053
81 T A 0.0000
82 L A 0.0000
83 Y A -0.6758
84 L A 0.0000
85 Q A -1.2863
86 M A 0.0000
87 N A -1.5404
88 S A -1.4130
89 L A 0.0000
90 R A -2.9205
91 A A -2.0125
92 E A -2.4676
93 D A 0.0000
94 T A -0.4862
95 A A 0.0000
96 V A 0.8377
97 Y A 0.0000
98 Y A 0.3129
99 C A 0.0000
100 A A 0.0000
101 A A 0.0000
102 N A 0.0000
103 E A -2.6512
104 N A -1.7864
105 I A 0.3081
106 P A 0.0000
107 R A -1.5080
108 N A -0.4683
109 M A 0.0000
110 F A 1.2656
111 N A -0.0720
112 P A -0.0748
113 S A -0.4102
114 D A 0.0000
115 Y A 0.0000
116 Q A -1.3970
117 Y A -0.6437
118 W A 0.0329
119 G A -0.1410
120 Q A -0.9087
121 G A 0.0345
122 T A 0.5822
123 L A 1.7318
124 V A 0.0000
125 T A 0.3607
126 V A 0.0000
127 S A -0.7033
128 S A -0.4448
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Laboratory of Theory of Biopolymers 2018