| Chain sequence(s) |
A: FEFEFEGSKGH
C: FEFEFEGSKGH B: FEFEFEGSKGH E: FEFEFEGSKGH D: FEFEFEGSKGH G: FEFEFEGSKGH F: FEFEFEGSKGH I: FEFEFEGSKGH H: FEFEFEGSKGH K: FEFEFEGSKGH J: FEFEFEGSKGH M: FEFEFEGSKGH L: FEFEFEGSKGH O: FEFEFEGSKGH N: FEFEFEGSKGH Q: FEFEFEGSKGH P: FEFEFEGSKGH S: FEFEFEGSKGH R: FEFEFEGSKGH T: FEFEFEGSKGH input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:16:27)
[INFO] Main: Simulation completed successfully. (00:16:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 0.0914 | |
| 2 | E | A | -0.2940 | |
| 3 | F | A | 0.0809 | |
| 4 | E | A | -0.1888 | |
| 5 | F | A | -0.0704 | |
| 6 | E | A | -1.0258 | |
| 7 | G | A | -0.6758 | |
| 8 | S | A | -0.9032 | |
| 9 | K | A | -1.0147 | |
| 10 | G | A | -1.3461 | |
| 11 | H | A | -1.2748 | |
| 1 | F | B | -0.8125 | |
| 2 | E | B | -1.1194 | |
| 3 | F | B | 0.0000 | |
| 4 | E | B | -1.0583 | |
| 5 | F | B | 0.0000 | |
| 6 | E | B | -0.7501 | |
| 7 | G | B | -0.4651 | |
| 8 | S | B | -0.1880 | |
| 9 | K | B | 0.0000 | |
| 10 | G | B | -0.3430 | |
| 11 | H | B | -0.7150 | |
| 1 | F | C | -0.4154 | |
| 2 | E | C | -1.5014 | |
| 3 | F | C | 0.0000 | |
| 4 | E | C | -1.6573 | |
| 5 | F | C | -1.0908 | |
| 6 | E | C | -1.8018 | |
| 7 | G | C | -1.0108 | |
| 8 | S | C | -0.9301 | |
| 9 | K | C | 0.0000 | |
| 10 | G | C | -1.1222 | |
| 11 | H | C | -1.1957 | |
| 1 | F | D | 0.7703 | |
| 2 | E | D | -1.2182 | |
| 3 | F | D | -0.1352 | |
| 4 | E | D | -2.2783 | |
| 5 | F | D | -1.4974 | |
| 6 | E | D | -2.8608 | |
| 7 | G | D | -2.2717 | |
| 8 | S | D | -2.1916 | |
| 9 | K | D | -2.6490 | |
| 10 | G | D | -2.1835 | |
| 11 | H | D | -2.0155 | |
| 1 | F | E | -0.6088 | |
| 2 | E | E | -2.4223 | |
| 3 | F | E | 0.0000 | |
| 4 | E | E | -3.3418 | |
| 5 | F | E | -2.7411 | |
| 6 | E | E | -3.8643 | |
| 7 | G | E | -2.8504 | |
| 8 | S | E | -2.6329 | |
| 9 | K | E | -2.4447 | |
| 10 | G | E | -2.3340 | |
| 11 | H | E | -2.2568 | |
| 1 | F | F | -1.2132 | |
| 2 | E | F | -2.6178 | |
| 3 | F | F | -2.0674 | |
| 4 | E | F | -3.0624 | |
| 5 | F | F | -2.4202 | |
| 6 | E | F | -3.8888 | |
| 7 | G | F | 0.0000 | |
| 8 | S | F | -2.5696 | |
| 9 | K | F | 0.0000 | |
| 10 | G | F | -1.7330 | |
| 11 | H | F | -1.2841 | |
| 1 | F | G | -0.7456 | |
| 2 | E | G | -2.4061 | |
| 3 | F | G | -1.5163 | |
| 4 | E | G | -2.9064 | |
| 5 | F | G | -2.1185 | |
| 6 | E | G | -3.6090 | |
| 7 | G | G | 0.0000 | |
| 8 | S | G | -2.3624 | |
| 9 | K | G | -1.5436 | |
| 10 | G | G | -1.6742 | |
| 11 | H | G | -1.0531 | |
| 1 | F | H | 0.3423 | |
| 2 | E | H | -1.6367 | |
| 3 | F | H | -1.3218 | |
| 4 | E | H | -2.0370 | |
| 5 | F | H | -1.1432 | |
| 6 | E | H | -2.4782 | |
| 7 | G | H | -2.0248 | |
| 8 | S | H | -1.8447 | |
| 9 | K | H | -1.6346 | |
| 10 | G | H | -1.4599 | |
| 11 | H | H | -1.2682 | |
| 1 | F | I | 1.0730 | |
| 2 | E | I | -0.5766 | |
| 3 | F | I | 0.7110 | |
| 4 | E | I | -1.0379 | |
| 5 | F | I | -0.6561 | |
| 6 | E | I | -1.8713 | |
| 7 | G | I | -1.0981 | |
| 8 | S | I | -1.4172 | |
| 9 | K | I | -1.8317 | |
| 10 | G | I | -1.2366 | |
| 11 | H | I | -1.0568 | |
| 1 | F | J | -0.5422 | |
| 2 | E | J | -1.3103 | |
| 3 | F | J | -0.6229 | |
| 4 | E | J | -1.2326 | |
| 5 | F | J | -0.7714 | |
| 6 | E | J | -2.0761 | |
| 7 | G | J | 0.0000 | |
| 8 | S | J | -0.7284 | |
| 9 | K | J | -0.3315 | |
| 10 | G | J | -0.4253 | |
| 11 | H | J | -0.5090 | |
| 1 | F | K | -0.0820 | |
| 2 | E | K | -0.5269 | |
| 3 | F | K | 0.1388 | |
| 4 | E | K | 0.0000 | |
| 5 | F | K | 0.0370 | |
| 6 | E | K | -0.3320 | |
| 7 | G | K | 0.0000 | |
| 8 | S | K | -0.2926 | |
| 9 | K | K | -0.5372 | |
| 10 | G | K | 0.0000 | |
| 11 | H | K | -0.8184 | |
| 1 | F | L | 0.0740 | |
| 2 | E | L | -0.4314 | |
| 3 | F | L | 0.3180 | |
| 4 | E | L | 0.0000 | |
| 5 | F | L | 0.8415 | |
| 6 | E | L | 0.0000 | |
| 7 | G | L | 0.0000 | |
| 8 | S | L | 0.0000 | |
| 9 | K | L | -0.0232 | |
| 10 | G | L | 0.0000 | |
| 11 | H | L | -0.6041 | |
| 1 | F | M | 0.2783 | |
| 2 | E | M | 0.0000 | |
| 3 | F | M | 0.6211 | |
| 4 | E | M | 0.0000 | |
| 5 | F | M | 0.9179 | |
| 6 | E | M | 0.0000 | |
| 7 | G | M | 0.0000 | |
| 8 | S | M | 0.0000 | |
| 9 | K | M | -0.0035 | |
| 10 | G | M | 0.0000 | |
| 11 | H | M | -0.5845 | |
| 1 | F | N | 0.2598 | |
| 2 | E | N | -0.1504 | |
| 3 | F | N | 0.3879 | |
| 4 | E | N | 0.2716 | |
| 5 | F | N | 0.9001 | |
| 6 | E | N | 0.0000 | |
| 7 | G | N | 0.0000 | |
| 8 | S | N | 0.0000 | |
| 9 | K | N | -0.0020 | |
| 10 | G | N | -0.0268 | |
| 11 | H | N | -0.6369 | |
| 1 | F | O | 0.0164 | |
| 2 | E | O | -0.3699 | |
| 3 | F | O | 0.4076 | |
| 4 | E | O | 0.0000 | |
| 5 | F | O | 0.8668 | |
| 6 | E | O | 0.2776 | |
| 7 | G | O | 0.0000 | |
| 8 | S | O | 0.0000 | |
| 9 | K | O | -0.1056 | |
| 10 | G | O | -0.4229 | |
| 11 | H | O | -0.5886 | |
| 1 | F | P | -0.3146 | |
| 2 | E | P | -0.4408 | |
| 3 | F | P | -0.0215 | |
| 4 | E | P | 0.0000 | |
| 5 | F | P | 0.2261 | |
| 6 | E | P | 0.0925 | |
| 7 | G | P | 0.0000 | |
| 8 | S | P | 0.0000 | |
| 9 | K | P | 0.0641 | |
| 10 | G | P | -0.1533 | |
| 11 | H | P | -0.3229 | |
| 1 | F | Q | 1.0521 | |
| 2 | E | Q | -0.2618 | |
| 3 | F | Q | 0.8249 | |
| 4 | E | Q | -0.3004 | |
| 5 | F | Q | 0.7498 | |
| 6 | E | Q | -1.1085 | |
| 7 | G | Q | -0.8952 | |
| 8 | S | Q | -1.2578 | |
| 9 | K | Q | -1.6663 | |
| 10 | G | Q | -1.2662 | |
| 11 | H | Q | -1.2912 | |
| 1 | F | R | 0.3348 | |
| 2 | E | R | -1.6214 | |
| 3 | F | R | -1.4707 | |
| 4 | E | R | -2.4456 | |
| 5 | F | R | -1.8655 | |
| 6 | E | R | -2.7600 | |
| 7 | G | R | -2.1546 | |
| 8 | S | R | -1.8165 | |
| 9 | K | R | -1.8552 | |
| 10 | G | R | -1.5538 | |
| 11 | H | R | -1.6496 | |
| 1 | F | S | -0.7802 | |
| 2 | E | S | -2.4031 | |
| 3 | F | S | 0.0000 | |
| 4 | E | S | -2.9447 | |
| 5 | F | S | 0.0000 | |
| 6 | E | S | -3.0599 | |
| 7 | G | S | -1.6950 | |
| 8 | S | S | -1.5242 | |
| 9 | K | S | 0.0000 | |
| 10 | G | S | -1.5266 | |
| 11 | H | S | -1.5317 | |
| 1 | F | T | -1.4228 | |
| 2 | E | T | -2.4400 | |
| 3 | F | T | -1.6610 | |
| 4 | E | T | -2.3947 | |
| 5 | F | T | 0.0000 | |
| 6 | E | T | -3.6203 | |
| 7 | G | T | 0.0000 | |
| 8 | S | T | -2.4604 | |
| 9 | K | T | 0.0000 | |
| 10 | G | T | -1.6733 | |
| 11 | H | T | -0.9889 |