Project name: query_structure

Status: done

Started: 2026-03-17 01:14:03
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Chain sequence(s) A: VSDVPRDLEVVAATPTSLLISWDAPNTQHGYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTTRPSISKPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:41)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:42)
Show buried residues

Minimal score value
-3.3079
Maximal score value
1.5291
Average score
-0.7894
Total score value
-71.8363

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.4265
2 S A 0.0091
3 D A -0.4111
4 V A -0.8456
5 P A 0.0000
6 R A -2.8667
7 D A -3.2622
8 L A 0.0000
9 E A -2.0988
10 V A 0.0839
11 V A 1.5291
12 A A 0.8847
13 A A 0.2872
14 T A -0.5333
15 P A -1.1345
16 T A -1.0040
17 S A -0.5397
18 L A 0.0000
19 L A 0.7172
20 I A 0.0000
21 S A -1.1148
22 W A 0.0000
23 D A -3.3079
24 A A -2.2235
25 P A -1.4338
26 N A -1.8010
27 T A -1.4662
28 Q A -2.3495
29 H A -1.9778
30 G A -1.0230
31 Y A -0.2721
32 Y A 0.0000
33 R A -0.3230
34 I A 0.0000
35 T A -0.5380
36 Y A -0.3117
37 G A 0.0000
38 E A -1.5893
39 T A -1.2954
40 G A -1.2539
41 G A -1.4117
42 N A -1.5309
43 S A -0.8345
44 P A -0.3188
45 V A 0.4329
46 Q A -0.8658
47 E A -1.6493
48 F A -0.6767
49 T A -0.2113
50 V A 0.0000
51 P A -0.9386
52 G A -1.3647
53 S A -1.5107
54 K A -2.1429
55 S A -1.5072
56 T A -0.7833
57 A A 0.0000
58 T A 0.2258
59 I A 0.0000
60 S A -0.6603
61 G A -1.0297
62 L A 0.0000
63 K A -2.3971
64 P A -1.6957
65 G A -1.4934
66 V A -1.4900
67 D A -2.2568
68 Y A 0.0000
69 T A -0.8148
70 I A 0.0000
71 T A -0.1794
72 V A 0.0000
73 Y A 0.1399
74 A A 0.0000
75 V A 0.0956
76 T A -0.6161
77 T A -0.9830
78 R A -1.4360
79 P A -0.5989
80 S A -0.2558
81 I A 0.8254
82 S A -0.2392
83 K A -1.3320
84 P A -0.6376
85 I A -0.6029
86 S A -0.7150
87 I A -0.7363
88 N A -1.7674
89 Y A -1.5341
90 R A -2.6140
91 T A -1.6849
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Laboratory of Theory of Biopolymers 2018