| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPNTQHGYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTTRPSISKPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:41)
[INFO] Main: Simulation completed successfully. (00:00:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.4265 | |
| 2 | S | A | 0.0091 | |
| 3 | D | A | -0.4111 | |
| 4 | V | A | -0.8456 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -2.8667 | |
| 7 | D | A | -3.2622 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.0988 | |
| 10 | V | A | 0.0839 | |
| 11 | V | A | 1.5291 | |
| 12 | A | A | 0.8847 | |
| 13 | A | A | 0.2872 | |
| 14 | T | A | -0.5333 | |
| 15 | P | A | -1.1345 | |
| 16 | T | A | -1.0040 | |
| 17 | S | A | -0.5397 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7172 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1148 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.3079 | |
| 24 | A | A | -2.2235 | |
| 25 | P | A | -1.4338 | |
| 26 | N | A | -1.8010 | |
| 27 | T | A | -1.4662 | |
| 28 | Q | A | -2.3495 | |
| 29 | H | A | -1.9778 | |
| 30 | G | A | -1.0230 | |
| 31 | Y | A | -0.2721 | |
| 32 | Y | A | 0.0000 | |
| 33 | R | A | -0.3230 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.5380 | |
| 36 | Y | A | -0.3117 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.5893 | |
| 39 | T | A | -1.2954 | |
| 40 | G | A | -1.2539 | |
| 41 | G | A | -1.4117 | |
| 42 | N | A | -1.5309 | |
| 43 | S | A | -0.8345 | |
| 44 | P | A | -0.3188 | |
| 45 | V | A | 0.4329 | |
| 46 | Q | A | -0.8658 | |
| 47 | E | A | -1.6493 | |
| 48 | F | A | -0.6767 | |
| 49 | T | A | -0.2113 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.9386 | |
| 52 | G | A | -1.3647 | |
| 53 | S | A | -1.5107 | |
| 54 | K | A | -2.1429 | |
| 55 | S | A | -1.5072 | |
| 56 | T | A | -0.7833 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2258 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6603 | |
| 61 | G | A | -1.0297 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3971 | |
| 64 | P | A | -1.6957 | |
| 65 | G | A | -1.4934 | |
| 66 | V | A | -1.4900 | |
| 67 | D | A | -2.2568 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.8148 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.1794 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.1399 | |
| 74 | A | A | 0.0000 | |
| 75 | V | A | 0.0956 | |
| 76 | T | A | -0.6161 | |
| 77 | T | A | -0.9830 | |
| 78 | R | A | -1.4360 | |
| 79 | P | A | -0.5989 | |
| 80 | S | A | -0.2558 | |
| 81 | I | A | 0.8254 | |
| 82 | S | A | -0.2392 | |
| 83 | K | A | -1.3320 | |
| 84 | P | A | -0.6376 | |
| 85 | I | A | -0.6029 | |
| 86 | S | A | -0.7150 | |
| 87 | I | A | -0.7363 | |
| 88 | N | A | -1.7674 | |
| 89 | Y | A | -1.5341 | |
| 90 | R | A | -2.6140 | |
| 91 | T | A | -1.6849 |