| Chain sequence(s) |
A: EVQLVQSGAEVKKPGQSLKISCKASGYSLTDNWIGWVRQKPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCVGLDWNYNPLRYWGPGTLVTVSSGGGGSGGGGSGGGGSGGGGSQSVLTQPPSVSAAPGQKVTISCSGSSSDIGSNYVSWYQQFPGTAPKLLIYDNNKRPSAIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSRLGIAVFGGGTQLTVL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:04)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:04)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:04)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:04)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:04)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:04)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 36 | E | A | -2.1200 | |
| 37 | V | A | -1.1408 | |
| 38 | Q | A | -1.2054 | |
| 39 | L | A | 0.0000 | |
| 40 | V | A | 0.8135 | |
| 41 | Q | A | 0.0868 | |
| 42 | S | A | -0.4164 | |
| 43 | G | A | -0.1381 | |
| 44 | A | A | 0.2097 | |
| 45 | E | A | 0.0986 | |
| 46 | V | A | 0.9520 | |
| 47 | K | A | -1.2093 | |
| 48 | K | A | -2.4577 | |
| 49 | P | A | -2.3742 | |
| 50 | G | A | -2.0531 | |
| 51 | Q | A | -2.2399 | |
| 52 | S | A | -1.8412 | |
| 53 | L | A | 0.0000 | |
| 54 | K | A | -2.0333 | |
| 55 | I | A | 0.0000 | |
| 56 | S | A | -0.6663 | |
| 57 | C | A | 0.0000 | |
| 58 | K | A | -1.1361 | |
| 59 | A | A | -0.6617 | |
| 60 | S | A | -1.1621 | |
| 61 | G | A | -1.2563 | |
| 62 | Y | A | -1.0766 | |
| 63 | S | A | -0.7766 | |
| 64 | L | A | 0.0000 | |
| 65 | T | A | -1.7959 | |
| 66 | D | A | -1.9505 | |
| 67 | N | A | 0.0000 | |
| 68 | W | A | 0.0000 | |
| 69 | I | A | 0.0000 | |
| 70 | G | A | 0.0000 | |
| 71 | W | A | 0.0000 | |
| 72 | V | A | 0.0000 | |
| 73 | R | A | -0.1342 | |
| 74 | Q | A | 0.0000 | |
| 75 | K | A | -0.6981 | |
| 76 | P | A | -0.7288 | |
| 77 | G | A | -0.9358 | |
| 78 | K | A | -0.9504 | |
| 79 | G | A | 0.0000 | |
| 80 | L | A | -0.1026 | |
| 81 | E | A | 0.0000 | |
| 82 | W | A | 0.3704 | |
| 83 | M | A | 0.0000 | |
| 84 | G | A | -0.2162 | |
| 85 | I | A | 0.0914 | |
| 86 | I | A | 0.0000 | |
| 87 | Y | A | -1.2869 | |
| 88 | P | A | 0.0000 | |
| 89 | G | A | -2.0557 | |
| 90 | D | A | -2.3737 | |
| 91 | S | A | -1.9199 | |
| 92 | D | A | -1.7382 | |
| 93 | T | A | -0.9940 | |
| 94 | R | A | -1.0628 | |
| 95 | Y | A | -0.5990 | |
| 96 | S | A | 0.0000 | |
| 97 | P | A | -0.5623 | |
| 98 | S | A | -0.5564 | |
| 99 | F | A | 0.0000 | |
| 100 | Q | A | -1.8819 | |
| 101 | G | A | -1.5941 | |
| 102 | Q | A | -1.8634 | |
| 103 | V | A | 0.0000 | |
| 104 | T | A | -0.9595 | |
| 105 | I | A | 0.0000 | |
| 106 | S | A | -0.4215 | |
| 107 | A | A | -0.8123 | |
| 108 | D | A | -1.1602 | |
| 109 | K | A | -1.7636 | |
| 110 | S | A | -0.2325 | |
| 111 | I | A | 0.8427 | |
| 112 | N | A | -0.7067 | |
| 113 | T | A | 0.0000 | |
| 114 | A | A | 0.0000 | |
| 115 | Y | A | -0.7352 | |
| 116 | L | A | 0.0000 | |
| 117 | Q | A | -1.5841 | |
| 118 | W | A | 0.0000 | |
| 119 | S | A | -1.3899 | |
| 120 | S | A | -1.6960 | |
| 121 | L | A | 0.0000 | |
| 122 | K | A | -2.4860 | |
| 123 | A | A | -1.5613 | |
| 124 | S | A | -0.9957 | |
| 125 | D | A | 0.0000 | |
| 126 | T | A | 0.0000 | |
| 127 | A | A | 0.0000 | |
| 128 | I | A | 0.3460 | |
| 129 | Y | A | 0.0000 | |
| 130 | Y | A | 0.6082 | |
| 131 | C | A | 0.0000 | |
| 132 | V | A | 0.0000 | |
| 133 | G | A | 0.0000 | |
| 134 | L | A | 0.0000 | |
| 135 | D | A | -0.9103 | |
| 136 | W | A | 0.1759 | |
| 137 | N | A | 0.2671 | |
| 138 | Y | A | 1.0032 | |
| 139 | N | A | -0.2078 | |
| 140 | P | A | -0.6180 | |
| 141 | L | A | -0.2945 | |
| 142 | R | A | -1.4909 | |
| 143 | Y | A | -0.0632 | |
| 144 | W | A | 1.0425 | |
| 145 | G | A | 0.0000 | |
| 146 | P | A | 0.3193 | |
| 147 | G | A | 0.4200 | |
| 148 | T | A | 0.0000 | |
| 149 | L | A | 0.7028 | |
| 150 | V | A | 0.0000 | |
| 151 | T | A | 0.0099 | |
| 152 | V | A | 0.0000 | |
| 153 | S | A | -0.8637 | |
| 154 | S | A | -0.6307 | |
| 155 | G | A | 0.0000 | |
| 156 | G | A | -1.0813 | |
| 157 | G | A | -0.9814 | |
| 158 | G | A | -1.1214 | |
| 159 | S | A | -1.0369 | |
| 160 | G | A | -1.3310 | |
| 161 | G | A | -1.3036 | |
| 162 | G | A | -1.6567 | |
| 163 | G | A | -1.5176 | |
| 164 | S | A | -1.3646 | |
| 165 | G | A | -1.1395 | |
| 166 | G | A | -1.4320 | |
| 167 | G | A | -1.4895 | |
| 168 | G | A | -1.2866 | |
| 169 | S | A | -1.3037 | |
| 170 | G | A | -1.3655 | |
| 171 | G | A | -1.3588 | |
| 172 | G | A | -1.4740 | |
| 173 | G | A | -1.5352 | |
| 174 | S | A | -1.1130 | |
| 175 | Q | A | -1.1981 | |
| 176 | S | A | -0.1212 | |
| 177 | V | A | 1.0666 | |
| 178 | L | A | 0.0000 | |
| 179 | T | A | -0.0303 | |
| 180 | Q | A | -0.3115 | |
| 181 | P | A | -0.5752 | |
| 182 | P | A | -0.7725 | |
| 183 | S | A | -0.8354 | |
| 184 | V | A | -0.3569 | |
| 185 | S | A | -0.2184 | |
| 186 | A | A | -0.4035 | |
| 187 | A | A | -0.4002 | |
| 188 | P | A | -1.1610 | |
| 189 | G | A | -1.8573 | |
| 190 | Q | A | -2.5110 | |
| 191 | K | A | -2.7231 | |
| 192 | V | A | 0.0000 | |
| 193 | T | A | -0.5124 | |
| 194 | I | A | 0.0000 | |
| 195 | S | A | -0.4150 | |
| 196 | C | A | 0.0000 | |
| 197 | S | A | -0.3937 | |
| 198 | G | A | -0.1442 | |
| 199 | S | A | -0.4077 | |
| 200 | S | A | -0.7866 | |
| 201 | S | A | -0.8541 | |
| 202 | D | A | 0.0000 | |
| 203 | I | A | 0.0000 | |
| 204 | G | A | -0.8958 | |
| 205 | S | A | -0.6972 | |
| 206 | N | A | 0.0064 | |
| 207 | Y | A | 0.7354 | |
| 208 | V | A | 0.0000 | |
| 209 | S | A | 0.0000 | |
| 210 | W | A | 0.0000 | |
| 211 | Y | A | 0.0000 | |
| 212 | Q | A | 0.0000 | |
| 213 | Q | A | 0.0000 | |
| 214 | F | A | -0.3775 | |
| 215 | P | A | -0.4530 | |
| 216 | G | A | -0.4943 | |
| 217 | T | A | -0.4198 | |
| 218 | A | A | -0.5430 | |
| 219 | P | A | 0.0000 | |
| 220 | K | A | -1.2725 | |
| 221 | L | A | -0.2273 | |
| 222 | L | A | 0.0000 | |
| 223 | I | A | 0.0000 | |
| 224 | Y | A | -0.4600 | |
| 225 | D | A | -0.8825 | |
| 226 | N | A | 0.0000 | |
| 227 | N | A | -2.1545 | |
| 228 | K | A | -2.4939 | |
| 229 | R | A | -2.4304 | |
| 230 | P | A | -0.9349 | |
| 231 | S | A | -0.7772 | |
| 232 | A | A | -0.3656 | |
| 233 | I | A | -0.7771 | |
| 234 | P | A | -1.4693 | |
| 235 | D | A | -2.6588 | |
| 236 | R | A | -2.2436 | |
| 237 | F | A | 0.0000 | |
| 238 | S | A | -1.5912 | |
| 239 | G | A | -1.2594 | |
| 240 | S | A | -1.2254 | |
| 241 | K | A | -1.2157 | |
| 242 | S | A | -0.9296 | |
| 243 | G | A | -1.0375 | |
| 244 | T | A | -0.9311 | |
| 245 | S | A | -0.8438 | |
| 246 | A | A | 0.0000 | |
| 247 | T | A | -0.5058 | |
| 248 | L | A | 0.0000 | |
| 249 | G | A | 0.0000 | |
| 250 | I | A | 0.0000 | |
| 251 | T | A | -2.0389 | |
| 252 | G | A | -1.8048 | |
| 253 | L | A | 0.0000 | |
| 254 | Q | A | -1.8996 | |
| 255 | T | A | -0.9467 | |
| 256 | G | A | -1.1653 | |
| 257 | D | A | -1.1975 | |
| 258 | E | A | -1.5136 | |
| 259 | A | A | 0.0000 | |
| 260 | D | A | -1.1662 | |
| 261 | Y | A | 0.0000 | |
| 262 | Y | A | 0.0000 | |
| 263 | C | A | 0.0000 | |
| 264 | G | A | 0.0000 | |
| 265 | T | A | 0.0000 | |
| 266 | W | A | 0.2089 | |
| 267 | D | A | -0.2806 | |
| 268 | S | A | -1.0151 | |
| 269 | R | A | -1.3596 | |
| 270 | L | A | 0.3442 | |
| 271 | G | A | -0.3249 | |
| 272 | I | A | 0.1769 | |
| 273 | A | A | 0.0000 | |
| 274 | V | A | 0.0000 | |
| 275 | F | A | 0.3991 | |
| 276 | G | A | 0.0000 | |
| 277 | G | A | -0.6924 | |
| 278 | G | A | -0.8822 | |
| 279 | T | A | 0.0000 | |
| 280 | Q | A | -1.6283 | |
| 281 | L | A | 0.0000 | |
| 282 | T | A | -0.4306 | |
| 283 | V | A | 0.1394 | |
| 284 | L | A | 1.4314 |