| Chain sequence(s) |
A: CGSKRAWCKEKKDCCCGYNCVYAWYNQQSSCERKWKYLFTGEC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:05)
[INFO] Main: Simulation completed successfully. (00:01:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.0866 | |
| 2 | G | A | 0.0000 | |
| 3 | S | A | -1.2594 | |
| 4 | K | A | -2.9362 | |
| 5 | R | A | -2.6570 | |
| 6 | A | A | -0.7806 | |
| 7 | W | A | -0.1764 | |
| 8 | C | A | -1.5343 | |
| 9 | K | A | -2.9573 | |
| 10 | E | A | -3.6995 | |
| 11 | K | A | -3.4790 | |
| 12 | K | A | -3.4752 | |
| 13 | D | A | -2.5613 | |
| 14 | C | A | 0.0000 | |
| 15 | C | A | -0.2712 | |
| 16 | C | A | 0.0488 | |
| 17 | G | A | -0.8668 | |
| 18 | Y | A | -1.7988 | |
| 19 | N | A | -1.7879 | |
| 20 | C | A | -1.7167 | |
| 21 | V | A | 0.6575 | |
| 22 | Y | A | 1.1354 | |
| 23 | A | A | 0.8377 | |
| 24 | W | A | 1.1261 | |
| 25 | Y | A | 0.9681 | |
| 26 | N | A | -0.9359 | |
| 27 | Q | A | -1.1316 | |
| 28 | Q | A | -1.1154 | |
| 29 | S | A | -0.6582 | |
| 30 | S | A | -0.7446 | |
| 31 | C | A | 0.0000 | |
| 32 | E | A | -2.9847 | |
| 33 | R | A | -3.1005 | |
| 34 | K | A | -1.5041 | |
| 35 | W | A | 0.0587 | |
| 36 | K | A | -0.5421 | |
| 37 | Y | A | 0.8231 | |
| 38 | L | A | 0.9358 | |
| 39 | F | A | 1.8138 | |
| 40 | T | A | 0.5764 | |
| 41 | G | A | -0.3188 | |
| 42 | E | A | -1.1793 | |
| 43 | C | A | -0.5893 |