Project name: query_structure

Status: done

Started: 2026-03-16 22:59:31
Settings
Chain sequence(s) A: CGSKRAWCKEKKDCCCGYNCVYAWYNQQSSCERKWKYLFTGEC
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:05)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:06)
Show buried residues

Minimal score value
-3.6995
Maximal score value
1.8138
Average score
-0.8766
Total score value
-37.6941

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 0.0866
2 G A 0.0000
3 S A -1.2594
4 K A -2.9362
5 R A -2.6570
6 A A -0.7806
7 W A -0.1764
8 C A -1.5343
9 K A -2.9573
10 E A -3.6995
11 K A -3.4790
12 K A -3.4752
13 D A -2.5613
14 C A 0.0000
15 C A -0.2712
16 C A 0.0488
17 G A -0.8668
18 Y A -1.7988
19 N A -1.7879
20 C A -1.7167
21 V A 0.6575
22 Y A 1.1354
23 A A 0.8377
24 W A 1.1261
25 Y A 0.9681
26 N A -0.9359
27 Q A -1.1316
28 Q A -1.1154
29 S A -0.6582
30 S A -0.7446
31 C A 0.0000
32 E A -2.9847
33 R A -3.1005
34 K A -1.5041
35 W A 0.0587
36 K A -0.5421
37 Y A 0.8231
38 L A 0.9358
39 F A 1.8138
40 T A 0.5764
41 G A -0.3188
42 E A -1.1793
43 C A -0.5893
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Laboratory of Theory of Biopolymers 2018