| Chain sequence(s) |
A: MEAGRPRPVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHYGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIAHQRMGD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:41)
[INFO] Main: Simulation completed successfully. (00:03:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.1223 | |
| 2 | E | A | -1.7251 | |
| 3 | A | A | -1.2567 | |
| 4 | G | A | -2.1210 | |
| 5 | R | A | -2.9697 | |
| 6 | P | A | -2.0375 | |
| 7 | R | A | -2.5947 | |
| 8 | P | A | -1.3543 | |
| 9 | V | A | -0.0749 | |
| 10 | L | A | 0.0000 | |
| 11 | R | A | -0.6779 | |
| 12 | S | A | 0.0000 | |
| 13 | V | A | 0.6346 | |
| 14 | N | A | -1.1099 | |
| 15 | S | A | -1.9095 | |
| 16 | R | A | -2.9956 | |
| 17 | E | A | -3.0923 | |
| 18 | P | A | -2.1780 | |
| 19 | S | A | 0.0000 | |
| 20 | Q | A | -1.7610 | |
| 21 | V | A | 0.0000 | |
| 22 | I | A | -1.0689 | |
| 23 | F | A | 0.0000 | |
| 24 | C | A | -1.3006 | |
| 25 | N | A | 0.0000 | |
| 26 | R | A | -2.2056 | |
| 27 | S | A | 0.0000 | |
| 28 | P | A | -0.9890 | |
| 29 | R | A | -0.9479 | |
| 30 | V | A | -0.1529 | |
| 31 | V | A | 0.0000 | |
| 32 | L | A | 0.0815 | |
| 33 | P | A | 0.0000 | |
| 34 | V | A | 0.0000 | |
| 35 | W | A | -0.2971 | |
| 36 | L | A | 0.0000 | |
| 37 | N | A | -1.0444 | |
| 38 | F | A | -0.7404 | |
| 39 | D | A | -2.1881 | |
| 40 | G | A | -1.7191 | |
| 41 | E | A | -2.6282 | |
| 42 | P | A | -1.5152 | |
| 43 | Q | A | -0.9454 | |
| 44 | P | A | -0.4181 | |
| 45 | Y | A | 0.1937 | |
| 46 | P | A | -0.2464 | |
| 47 | T | A | -0.0751 | |
| 48 | L | A | 0.0000 | |
| 49 | P | A | -0.6237 | |
| 50 | P | A | -1.0905 | |
| 51 | G | A | -1.2984 | |
| 52 | T | A | -1.1878 | |
| 53 | G | A | -1.9683 | |
| 54 | R | A | -2.7680 | |
| 55 | R | A | -2.8658 | |
| 56 | I | A | -1.8150 | |
| 57 | H | A | -1.7518 | |
| 58 | S | A | 0.0000 | |
| 59 | Y | A | -1.6203 | |
| 60 | R | A | -2.0462 | |
| 61 | G | A | -0.4347 | |
| 62 | H | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | W | A | 0.0000 | |
| 65 | L | A | 0.0000 | |
| 66 | F | A | 0.0000 | |
| 67 | R | A | 0.0000 | |
| 68 | D | A | 0.0000 | |
| 69 | A | A | -0.3025 | |
| 70 | G | A | -0.5365 | |
| 71 | T | A | -0.7672 | |
| 72 | H | A | -0.8490 | |
| 73 | Y | A | -0.5549 | |
| 74 | G | A | -0.5099 | |
| 75 | L | A | 0.0000 | |
| 76 | L | A | -0.7206 | |
| 77 | V | A | 0.0000 | |
| 78 | N | A | -1.6320 | |
| 79 | Q | A | -1.8847 | |
| 80 | T | A | -1.5897 | |
| 81 | E | A | -1.8719 | |
| 82 | L | A | 0.0000 | |
| 83 | F | A | 0.0000 | |
| 84 | V | A | 1.1970 | |
| 85 | P | A | 0.0000 | |
| 86 | S | A | -0.2013 | |
| 87 | L | A | -0.4306 | |
| 88 | N | A | -0.7602 | |
| 89 | V | A | 0.4075 | |
| 90 | D | A | -1.5452 | |
| 91 | G | A | -1.4872 | |
| 92 | Q | A | -1.4715 | |
| 93 | P | A | -0.7872 | |
| 94 | I | A | 0.3095 | |
| 95 | F | A | 0.3030 | |
| 96 | A | A | 0.0000 | |
| 97 | N | A | -0.9874 | |
| 98 | I | A | 0.0000 | |
| 99 | T | A | -0.7318 | |
| 100 | L | A | 0.4064 | |
| 101 | P | A | 0.8424 | |
| 102 | V | A | 1.8862 | |
| 103 | Y | A | 0.6004 | |
| 104 | T | A | 0.1543 | |
| 105 | L | A | 0.4484 | |
| 106 | K | A | -1.2082 | |
| 107 | E | A | -1.3801 | |
| 108 | R | A | -1.2969 | |
| 109 | C | A | -0.5438 | |
| 110 | L | A | 0.0000 | |
| 111 | Q | A | -0.4213 | |
| 112 | V | A | 0.4363 | |
| 113 | V | A | 0.5203 | |
| 114 | R | A | -0.2120 | |
| 115 | S | A | 0.4923 | |
| 116 | L | A | 1.3515 | |
| 117 | V | A | -0.2500 | |
| 118 | K | A | -2.1702 | |
| 119 | P | A | -2.4626 | |
| 120 | E | A | -3.4910 | |
| 121 | N | A | -3.1565 | |
| 122 | Y | A | 0.0000 | |
| 123 | R | A | -3.2338 | |
| 124 | R | A | -3.1157 | |
| 125 | L | A | -1.6661 | |
| 126 | D | A | -1.8171 | |
| 127 | I | A | -0.0866 | |
| 128 | V | A | 0.7707 | |
| 129 | R | A | -1.5899 | |
| 130 | S | A | -0.9425 | |
| 131 | L | A | -1.2555 | |
| 132 | Y | A | 0.0000 | |
| 133 | E | A | -3.6966 | |
| 134 | D | A | -3.1312 | |
| 135 | L | A | 0.0000 | |
| 136 | E | A | -4.0715 | |
| 137 | D | A | -3.8046 | |
| 138 | H | A | -2.9061 | |
| 139 | P | A | -2.0098 | |
| 140 | N | A | -2.3012 | |
| 141 | V | A | -2.0866 | |
| 142 | Q | A | -3.2625 | |
| 143 | K | A | -3.8359 | |
| 144 | D | A | -3.2739 | |
| 145 | L | A | 0.0000 | |
| 146 | E | A | -4.2357 | |
| 147 | R | A | -4.3932 | |
| 148 | L | A | -3.0570 | |
| 149 | T | A | -2.6172 | |
| 150 | Q | A | -3.3948 | |
| 151 | E | A | -3.8455 | |
| 152 | R | A | -3.2352 | |
| 153 | I | A | -1.6847 | |
| 154 | A | A | -2.2273 | |
| 155 | H | A | -2.9809 | |
| 156 | Q | A | -3.2480 | |
| 157 | R | A | -2.9005 | |
| 158 | M | A | -1.2260 | |
| 159 | G | A | -2.0269 | |
| 160 | D | A | -2.6545 |