Project name: 3d817e83bc2a09e

Status: done

Started: 2024-06-17 20:39:33
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Chain sequence(s) A: KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRLKVFGRCELAAAM
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:55)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:56)
Show buried residues

Minimal score value
-3.4712
Maximal score value
1.2726
Average score
-1.0517
Total score value
-148.2833

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -1.0520
2 V A 0.2804
3 F A 0.0000
4 G A -1.0673
5 R A -1.3440
6 C A -1.3672
7 E A -1.6883
8 L A 0.0000
9 A A 0.0000
10 A A -1.4412
11 A A -1.4883
12 M A 0.0000
13 K A -2.0741
14 R A -2.4594
15 H A -1.9346
16 G A -1.8806
17 L A 0.0000
18 D A -2.3166
19 N A -2.3212
20 Y A -1.7958
21 R A -2.4039
22 G A -1.8301
23 Y A -1.2455
24 S A -1.3516
25 L A 0.0000
26 G A 0.0000
27 N A -1.0434
28 W A 0.0000
29 V A 0.0000
30 C A 0.0000
31 A A 0.0000
32 A A 0.0000
33 K A -1.1323
34 F A -0.5939
35 E A -0.6480
36 S A 0.0000
37 N A -1.3720
38 F A 0.0000
39 N A -0.9913
40 T A 0.0000
41 Q A -1.3130
42 A A -1.1486
43 T A -1.5570
44 N A -2.4466
45 R A -3.1253
46 N A -2.4470
47 T A -1.6374
48 D A -2.4872
49 G A -2.1042
50 S A 0.0000
51 T A 0.0000
52 D A -1.5272
53 Y A -0.8780
54 G A 0.0000
55 I A 0.0000
56 L A 0.0000
57 Q A 0.0000
58 I A 0.0000
59 N A -1.2353
60 S A 0.0000
61 R A -2.5404
62 W A -1.0903
63 W A -1.0678
64 C A 0.0000
65 N A -2.5152
66 D A -2.0568
67 G A -1.9561
68 R A -2.6803
69 T A -2.3580
70 P A -1.7287
71 G A -1.4888
72 S A -2.2400
73 R A -2.4764
74 N A -1.8865
75 L A -0.8785
76 C A -1.0750
77 N A -1.4945
78 I A -0.8035
79 P A -1.0570
80 C A 0.0000
81 S A -0.5652
82 A A -0.4063
83 L A 0.0000
84 L A -0.8967
85 S A -1.2500
86 S A -1.4454
87 D A -2.0545
88 I A 0.0000
89 T A -1.0131
90 A A -0.7267
91 S A 0.0000
92 V A 0.0000
93 N A -1.7193
94 C A 0.0000
95 A A 0.0000
96 K A -1.8542
97 K A -2.0517
98 I A 0.0000
99 V A 0.0000
100 S A -2.1775
101 D A -2.7444
102 G A -2.1827
103 N A -2.1737
104 G A -1.9322
105 M A 0.0000
106 N A -1.5434
107 A A -0.7313
108 W A 0.0000
109 V A 0.4191
110 A A -0.9876
111 W A 0.0000
112 R A -3.1290
113 N A -3.0216
114 R A -3.1176
115 C A 0.0000
116 K A -3.4712
117 G A -2.2978
118 T A -2.0855
119 D A -2.4772
120 V A 0.0000
121 Q A -2.0489
122 A A -1.5260
123 W A -1.0193
124 I A -1.1760
125 R A -2.2414
126 G A -1.5139
127 C A -1.4569
128 R A -1.8351
129 L A -0.7518
1 K A -0.6408
2 V A 1.0960
3 F A 0.7884
4 G A -0.4045
5 R A -1.2272
6 C A -0.1467
7 E A -0.2259
8 L A 0.6858
9 A A 0.3937
10 A A 0.3512
11 A A 0.8429
12 M A 1.2726
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Laboratory of Theory of Biopolymers 2018