Project name: AAB-PP3136

Status: done

Started: 2026-03-31 14:38:07
Settings
Chain sequence(s) H: QVQLVESGGGVVQPGESLKISCAASGFTFSSYAMHWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARSTYYYSGSGYDYYFSPWGPGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQHIRSSLAWYQQKPGKAPKLLIYGASSRATGIPDRFSGSGSGTDFTLTISSLQPEDFATYYCQHTYITPYTFGQGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:00)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:02)
Show buried residues

Minimal score value
-3.1592
Maximal score value
2.2876
Average score
-0.5522
Total score value
-128.1188

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
0 Q H -1.3202
1 V H -0.6603
2 Q H -0.7863
3 L H 0.0000
4 V H 1.4094
5 E H 0.0000
6 S H -0.1168
7 G H -0.7689
8 G H 0.1467
9 G H 0.9357
10 V H 1.5578
11 V H 0.0000
12 Q H -1.7854
13 P H -1.9044
14 G H -2.0580
15 E H -2.2305
16 S H -1.6169
17 L H -1.0046
18 K H -1.9370
19 I H 0.0000
20 S H -0.3146
21 C H 0.0000
22 A H 0.0337
23 A H 0.0000
24 S H -0.5579
25 G H -0.8650
26 F H -0.3016
27 T H -0.1827
28 F H 0.0000
29 S H -0.8178
30 S H -0.0829
31 Y H 0.2925
32 A H 0.1588
33 M H 0.0000
34 H H 0.0000
35 W H 0.0000
36 V H 0.0000
37 R H 0.0000
38 Q H -0.7139
39 A H -1.0389
40 P H -0.9808
41 G H -1.5053
42 K H -2.3825
43 G H -1.6177
44 L H 0.0000
45 E H -1.2231
46 W H 0.0000
47 V H 0.0000
48 S H 0.0000
49 A H 0.0000
50 I H 0.0000
51 S H -0.2778
52 G H -0.4672
53 S H -0.7135
54 G H -0.8170
55 G H -0.7433
56 S H -0.2712
57 T H 0.2830
58 Y H 0.6671
59 Y H -0.3169
60 A H -1.1567
61 D H -2.3318
62 S H -1.7123
63 V H 0.0000
64 K H -2.4210
65 G H -1.6970
66 R H -1.2516
67 F H 0.0000
68 T H -0.6642
69 I H 0.0000
70 S H -0.4646
71 R H -1.0829
72 D H -1.6529
73 N H -1.8137
74 S H -1.6409
75 K H -2.4423
76 N H -1.8730
77 T H -1.0092
78 L H 0.0000
79 Y H -0.4660
80 L H 0.0000
81 Q H -1.1229
82 M H 0.0000
83 N H -1.7213
84 S H -1.6523
85 L H 0.0000
86 R H -2.7468
87 A H -1.8985
88 E H -2.3049
89 D H 0.0000
90 T H -0.4242
91 A H 0.0000
92 V H 0.9036
93 Y H 0.0000
94 Y H 0.0000
95 C H 0.0000
96 A H 0.0000
97 R H -0.2023
98 S H 0.0000
99 T H 1.0594
100 Y H 2.2876
101 Y H 2.2181
102 Y H 1.7705
103 S H 0.2281
104 G H -0.4643
105 S H -0.2739
106 G H 0.1692
107 Y H 1.7943
108 D H 1.5877
109 Y H 1.6072
110 Y H 0.7342
111 F H 0.0000
112 S H -0.2184
113 P H -0.4834
114 W H -0.3677
115 G H 0.0000
116 P H -0.3505
117 G H 0.1926
118 T H 0.7510
119 L H 1.7415
120 V H 0.0000
121 T H 0.3771
122 V H 0.0000
123 S H -0.6586
124 S H -0.5988
125 D L -2.0071
126 I L 0.0000
127 Q L -2.1936
128 M L 0.0000
129 T L -1.2805
130 Q L 0.0000
131 S L -0.7313
132 P L -0.5981
133 S L -0.9592
134 S L -1.1325
135 L L -0.6517
136 S L -0.7039
137 A L 0.0000
138 S L -0.1485
139 V L 0.7188
140 G L -0.7067
141 D L -1.6686
142 R L -2.3428
143 V L 0.0000
144 T L -0.6350
145 I L 0.0000
146 T L -0.9483
147 C L 0.0000
148 R L -3.0416
149 A L 0.0000
150 S L -2.2568
151 Q L -2.8593
152 H L -2.5706
153 I L 0.0000
154 R L -2.5968
155 S L -1.4645
156 S L -0.3889
157 L L 0.0000
158 A L 0.0000
159 W L 0.0000
160 Y L 0.0000
161 Q L -1.0061
162 Q L 0.0000
163 K L -2.0262
164 P L -1.4698
165 G L -1.6564
166 K L -2.5542
167 A L -1.5274
168 P L 0.0000
169 K L -1.9921
170 L L -0.7939
171 L L 0.0000
172 I L 0.0000
173 Y L -0.1841
174 G L -0.8096
175 A L 0.0000
176 S L -0.7904
177 S L -0.8352
178 R L -1.6610
179 A L -0.8894
180 T L -0.5883
181 G L -0.9209
182 I L 0.0000
183 P L -1.3870
184 D L -2.3069
185 R L -1.6180
186 F L 0.0000
187 S L -1.0293
188 G L -0.5935
189 S L -0.8338
190 G L -1.4388
191 S L -1.8332
192 G L -2.4331
193 T L -2.6644
194 D L -3.1592
195 F L 0.0000
196 T L -0.9090
197 L L 0.0000
198 T L -0.6142
199 I L 0.0000
200 S L -1.6832
201 S L -1.2900
202 L L 0.0000
203 Q L -0.7758
204 P L -0.6465
205 E L -1.8864
206 D L 0.0000
207 F L -0.5659
208 A L 0.0000
209 T L -1.2462
210 Y L 0.0000
211 Y L 0.0000
212 C L 0.0000
213 Q L 0.0000
214 H L 0.0000
215 T L 1.2003
216 Y L 1.5394
217 I L 2.0530
218 T L 0.8456
219 P L 0.0153
220 Y L 0.0000
221 T L -0.4581
222 F L -0.4808
223 G L 0.0000
224 Q L -1.5889
225 G L 0.0000
226 T L 0.0000
227 K L -2.0579
228 V L 0.0000
229 E L -0.9095
230 I L 0.9387
231 K L -0.7860
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Laboratory of Theory of Biopolymers 2018