| Chain sequence(s) |
B: VDNKFNKEMWIAWEEIRDLPNLNGWQMTAFIASLLDDPSQSANLLAEAKKLNDAQAPK
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 15 | V | B | 0.4844 | |
| 16 | D | B | -1.9380 | |
| 17 | N | B | -2.3819 | |
| 18 | K | B | -2.1347 | |
| 19 | F | B | 0.0966 | |
| 20 | N | B | -1.2435 | |
| 21 | K | B | -1.9118 | |
| 22 | E | B | -1.7036 | |
| 23 | M | B | 0.0000 | |
| 24 | W | B | 0.8669 | |
| 25 | I | B | 0.3627 | |
| 26 | A | B | 0.0000 | |
| 27 | W | B | -0.0041 | |
| 28 | E | B | -1.3245 | |
| 29 | E | B | -1.6899 | |
| 30 | I | B | 0.0000 | |
| 31 | R | B | -2.5655 | |
| 32 | D | B | -2.8205 | |
| 33 | L | B | -2.1028 | |
| 34 | P | B | -1.6280 | |
| 35 | N | B | -1.5174 | |
| 36 | L | B | 0.0000 | |
| 37 | N | B | -1.3885 | |
| 38 | G | B | -0.6956 | |
| 39 | W | B | 0.6005 | |
| 40 | Q | B | -0.0876 | |
| 41 | M | B | -0.4843 | |
| 42 | T | B | 0.0837 | |
| 43 | A | B | 0.5056 | |
| 44 | F | B | 0.1596 | |
| 45 | I | B | 0.2807 | |
| 46 | A | B | -0.0694 | |
| 47 | S | B | -0.5783 | |
| 48 | L | B | 0.0000 | |
| 49 | L | B | -0.1713 | |
| 50 | D | B | -2.4915 | |
| 51 | D | B | -2.2805 | |
| 52 | P | B | 0.0000 | |
| 53 | S | B | -1.5649 | |
| 54 | Q | B | -1.3829 | |
| 55 | S | B | 0.0000 | |
| 56 | A | B | -1.1086 | |
| 57 | N | B | -1.7497 | |
| 58 | L | B | -1.2729 | |
| 59 | L | B | -1.0646 | |
| 60 | A | B | -1.7204 | |
| 61 | E | B | -2.4347 | |
| 62 | A | B | 0.0000 | |
| 63 | K | B | -2.8456 | |
| 64 | K | B | -3.1083 | |
| 65 | L | B | -1.8805 | |
| 66 | N | B | -2.3208 | |
| 67 | D | B | -2.7203 | |
| 68 | A | B | -1.5596 | |
| 69 | Q | B | -1.7808 | |
| 70 | A | B | -1.3716 | |
| 71 | P | B | -1.4783 | |
| 72 | K | B | -1.8693 |