| Chain sequence(s) |
B: MTEKEKRKWEMKRKAWEVISATPASDRGRQMWWWNQYYIVDMMESEEDIEWMEKQIEEPYKKEMAEIEKLKS
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:27)
[INFO] Main: Simulation completed successfully. (00:03:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | B | -0.1758 | |
| 2 | T | B | -1.4507 | |
| 3 | E | B | -2.8106 | |
| 4 | K | B | -3.3374 | |
| 5 | E | B | -2.8718 | |
| 6 | K | B | -2.5591 | |
| 7 | R | B | -2.9119 | |
| 8 | K | B | -2.2385 | |
| 9 | W | B | -1.3323 | |
| 10 | E | B | -1.5276 | |
| 11 | M | B | 0.0000 | |
| 12 | K | B | -0.7086 | |
| 13 | R | B | -0.9705 | |
| 14 | K | B | -1.0819 | |
| 15 | A | B | 0.0000 | |
| 16 | W | B | -0.0213 | |
| 17 | E | B | -0.5498 | |
| 18 | V | B | 0.0000 | |
| 19 | I | B | 0.0000 | |
| 20 | S | B | -0.2316 | |
| 21 | A | B | -0.3485 | |
| 22 | T | B | 0.0000 | |
| 23 | P | B | -0.9518 | |
| 24 | A | B | -1.0094 | |
| 25 | S | B | -1.2770 | |
| 26 | D | B | -2.0105 | |
| 27 | R | B | -2.5005 | |
| 28 | G | B | -1.7645 | |
| 29 | R | B | -1.9092 | |
| 30 | Q | B | -1.2147 | |
| 31 | M | B | -0.2383 | |
| 32 | W | B | -0.0987 | |
| 33 | W | B | 0.0000 | |
| 34 | W | B | 0.2210 | |
| 35 | N | B | -0.1212 | |
| 36 | Q | B | 0.0195 | |
| 37 | Y | B | 0.3871 | |
| 38 | Y | B | 0.7532 | |
| 39 | I | B | 0.4072 | |
| 40 | V | B | 0.0000 | |
| 41 | D | B | -1.0137 | |
| 42 | M | B | 0.0254 | |
| 43 | M | B | 0.0000 | |
| 44 | E | B | -2.7847 | |
| 45 | S | B | -2.8517 | |
| 46 | E | B | -3.9868 | |
| 47 | E | B | -3.5740 | |
| 48 | D | B | -2.6118 | |
| 49 | I | B | 0.0000 | |
| 50 | E | B | -3.0978 | |
| 51 | W | B | -1.3083 | |
| 52 | M | B | 0.0000 | |
| 53 | E | B | -2.4906 | |
| 54 | K | B | -2.9597 | |
| 55 | Q | B | -2.0692 | |
| 56 | I | B | 0.0000 | |
| 57 | E | B | -3.5073 | |
| 58 | E | B | -3.9176 | |
| 59 | P | B | -2.6497 | |
| 60 | Y | B | -2.5510 | |
| 61 | K | B | -3.6043 | |
| 62 | K | B | -3.5641 | |
| 63 | E | B | -2.6786 | |
| 64 | M | B | -2.1905 | |
| 65 | A | B | -2.6160 | |
| 66 | E | B | -3.3545 | |
| 67 | I | B | -2.4451 | |
| 68 | E | B | -3.2278 | |
| 69 | K | B | -2.9970 | |
| 70 | L | B | -1.1397 | |
| 71 | K | B | -2.4146 | |
| 72 | S | B | -1.5002 |