| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPAVTVDFYVITYGETGGWWYAAQEFTVPGSKSTATISGLKPGVDYTITVYAYPDHHYQGRSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:38)
[INFO] Main: Simulation completed successfully. (00:00:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7270 | |
| 2 | S | A | 0.3434 | |
| 3 | D | A | -0.2404 | |
| 4 | V | A | -0.7398 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.1039 | |
| 7 | D | A | -3.3730 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.1236 | |
| 10 | V | A | 0.0791 | |
| 11 | V | A | 1.5327 | |
| 12 | A | A | 0.8878 | |
| 13 | A | A | 0.2920 | |
| 14 | T | A | -0.3423 | |
| 15 | P | A | -1.1223 | |
| 16 | T | A | -0.9944 | |
| 17 | S | A | -0.5321 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7307 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1578 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.2132 | |
| 24 | A | A | -1.5949 | |
| 25 | P | A | 0.0000 | |
| 26 | A | A | 0.3193 | |
| 27 | V | A | 0.5874 | |
| 28 | T | A | -0.4002 | |
| 29 | V | A | -1.1586 | |
| 30 | D | A | -2.4268 | |
| 31 | F | A | -1.4002 | |
| 32 | Y | A | 0.0000 | |
| 33 | V | A | 0.0000 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | Y | A | -0.8003 | |
| 37 | G | A | -0.8650 | |
| 38 | E | A | -1.9502 | |
| 39 | T | A | -1.4634 | |
| 40 | G | A | -0.7267 | |
| 41 | G | A | -0.0568 | |
| 42 | W | A | 1.7429 | |
| 43 | W | A | 1.9881 | |
| 44 | Y | A | 2.0523 | |
| 45 | A | A | 0.7682 | |
| 46 | A | A | -0.0688 | |
| 47 | Q | A | -1.3886 | |
| 48 | E | A | -1.9800 | |
| 49 | F | A | -0.5611 | |
| 50 | T | A | -0.1531 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -1.1551 | |
| 53 | G | A | -1.3981 | |
| 54 | S | A | -1.4162 | |
| 55 | K | A | -2.2593 | |
| 56 | S | A | -1.4535 | |
| 57 | T | A | -0.7882 | |
| 58 | A | A | 0.0000 | |
| 59 | T | A | 0.2335 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | -0.6574 | |
| 62 | G | A | -1.0271 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.5559 | |
| 65 | P | A | -1.7939 | |
| 66 | G | A | -1.6866 | |
| 67 | V | A | -2.0103 | |
| 68 | D | A | -3.2636 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | -1.3480 | |
| 71 | I | A | 0.0000 | |
| 72 | T | A | 0.0000 | |
| 73 | V | A | 0.0000 | |
| 74 | Y | A | -0.0954 | |
| 75 | A | A | 0.0000 | |
| 76 | Y | A | 0.0000 | |
| 77 | P | A | -1.7155 | |
| 78 | D | A | -2.6593 | |
| 79 | H | A | -2.2679 | |
| 80 | H | A | -1.7265 | |
| 81 | Y | A | -0.4195 | |
| 82 | Q | A | -1.4639 | |
| 83 | G | A | -1.3047 | |
| 84 | R | A | -1.3299 | |
| 85 | S | A | -0.8947 | |
| 86 | P | A | -0.5885 | |
| 87 | I | A | -0.4475 | |
| 88 | S | A | -0.7301 | |
| 89 | I | A | -0.7656 | |
| 90 | N | A | -2.0459 | |
| 91 | Y | A | -1.8755 | |
| 92 | R | A | -3.0413 | |
| 93 | T | A | -1.8842 |