| Chain sequence(s) |
A: APTTTTKVDIAAFNPDKDGTIELKEALAAGSAAFDKLDPDKDGTLEAKELKGRVSEADLKKLDPDNDGTLEKKEYLAAVEAQFKAANPDNDGTIEARELASPAGSALVNLIR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:00)
[INFO] Main: Simulation completed successfully. (00:00:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.0965 | |
| 2 | P | A | -0.2991 | |
| 3 | T | A | -0.2464 | |
| 4 | T | A | -0.5174 | |
| 5 | T | A | -0.7175 | |
| 6 | T | A | -1.1165 | |
| 7 | K | A | -2.2711 | |
| 8 | V | A | -1.5088 | |
| 9 | D | A | -1.9140 | |
| 10 | I | A | -1.2519 | |
| 11 | A | A | -1.2752 | |
| 12 | A | A | -0.7360 | |
| 13 | F | A | -0.8122 | |
| 14 | N | A | 0.0000 | |
| 15 | P | A | -1.8933 | |
| 16 | D | A | -3.3591 | |
| 17 | K | A | -3.5573 | |
| 18 | D | A | -3.4627 | |
| 19 | G | A | -2.2078 | |
| 20 | T | A | -1.5290 | |
| 21 | I | A | 0.0000 | |
| 22 | E | A | -1.4680 | |
| 23 | L | A | -0.9498 | |
| 24 | K | A | -1.5913 | |
| 25 | E | A | 0.0000 | |
| 26 | A | A | 0.0000 | |
| 27 | L | A | -0.1628 | |
| 28 | A | A | -0.1310 | |
| 29 | A | A | -0.4555 | |
| 30 | G | A | 0.0000 | |
| 31 | S | A | -0.6306 | |
| 32 | A | A | -0.9113 | |
| 33 | A | A | 0.0000 | |
| 34 | F | A | 0.0000 | |
| 35 | D | A | -2.6950 | |
| 36 | K | A | -2.8052 | |
| 37 | L | A | -2.0668 | |
| 38 | D | A | 0.0000 | |
| 39 | P | A | -2.6103 | |
| 40 | D | A | -3.6256 | |
| 41 | K | A | -4.0171 | |
| 42 | D | A | -3.5738 | |
| 43 | G | A | -2.8217 | |
| 44 | T | A | -2.4888 | |
| 45 | L | A | 0.0000 | |
| 46 | E | A | -1.9735 | |
| 47 | A | A | -2.4088 | |
| 48 | K | A | -2.8477 | |
| 49 | E | A | -2.0885 | |
| 50 | L | A | 0.0000 | |
| 51 | K | A | -3.0391 | |
| 52 | G | A | -1.9862 | |
| 53 | R | A | -1.7332 | |
| 54 | V | A | -1.5850 | |
| 55 | S | A | -2.2204 | |
| 56 | E | A | -3.2896 | |
| 57 | A | A | -2.1946 | |
| 58 | D | A | -2.6401 | |
| 59 | L | A | 0.0000 | |
| 60 | K | A | -4.0027 | |
| 61 | K | A | -3.4345 | |
| 62 | L | A | -2.2093 | |
| 63 | D | A | 0.0000 | |
| 64 | P | A | -2.5528 | |
| 65 | D | A | -3.5402 | |
| 66 | N | A | -3.8224 | |
| 67 | D | A | -3.6145 | |
| 68 | G | A | -2.6477 | |
| 69 | T | A | -2.3682 | |
| 70 | L | A | 0.0000 | |
| 71 | E | A | -2.6820 | |
| 72 | K | A | -2.2655 | |
| 73 | K | A | -2.4237 | |
| 74 | E | A | -1.7970 | |
| 75 | Y | A | 0.0000 | |
| 76 | L | A | -0.7233 | |
| 77 | A | A | -0.6967 | |
| 78 | A | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | E | A | -1.0591 | |
| 81 | A | A | -0.8209 | |
| 82 | Q | A | -0.8729 | |
| 83 | F | A | 0.0000 | |
| 84 | K | A | -2.5830 | |
| 85 | A | A | -1.3754 | |
| 86 | A | A | 0.0000 | |
| 87 | N | A | 0.0000 | |
| 88 | P | A | -2.1247 | |
| 89 | D | A | -3.2503 | |
| 90 | N | A | -3.5057 | |
| 91 | D | A | -3.3627 | |
| 92 | G | A | -2.4139 | |
| 93 | T | A | -1.8509 | |
| 94 | I | A | 0.0000 | |
| 95 | E | A | -1.3878 | |
| 96 | A | A | -1.5439 | |
| 97 | R | A | -2.0998 | |
| 98 | E | A | 0.0000 | |
| 99 | L | A | 0.0000 | |
| 100 | A | A | -1.2474 | |
| 101 | S | A | -0.5925 | |
| 102 | P | A | -0.3034 | |
| 103 | A | A | -0.4698 | |
| 104 | G | A | 0.0000 | |
| 105 | S | A | -0.4449 | |
| 106 | A | A | -0.2918 | |
| 107 | L | A | 0.0000 | |
| 108 | V | A | 0.0000 | |
| 109 | N | A | -1.0536 | |
| 110 | L | A | 0.0000 | |
| 111 | I | A | 0.0000 | |
| 112 | R | A | -2.0388 |