Project name: lanm_C5

Status: done

Started: 2026-07-27 01:21:41
Settings
Chain sequence(s) A: APTTTTKVDIAAFNPDKDGTIELKEALAAGSAAFDKLDPDKDGTLEAKELKGRVSEADLKKLDPDNDGTLEKKEYLAAVEAQFKAANPDNDGTIEARELASPAGSALVNLIR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:00)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:01)
Show buried residues

Minimal score value
-4.0171
Maximal score value
0.0
Average score
-1.4576
Total score value
-163.2568

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.0965
2 P A -0.2991
3 T A -0.2464
4 T A -0.5174
5 T A -0.7175
6 T A -1.1165
7 K A -2.2711
8 V A -1.5088
9 D A -1.9140
10 I A -1.2519
11 A A -1.2752
12 A A -0.7360
13 F A -0.8122
14 N A 0.0000
15 P A -1.8933
16 D A -3.3591
17 K A -3.5573
18 D A -3.4627
19 G A -2.2078
20 T A -1.5290
21 I A 0.0000
22 E A -1.4680
23 L A -0.9498
24 K A -1.5913
25 E A 0.0000
26 A A 0.0000
27 L A -0.1628
28 A A -0.1310
29 A A -0.4555
30 G A 0.0000
31 S A -0.6306
32 A A -0.9113
33 A A 0.0000
34 F A 0.0000
35 D A -2.6950
36 K A -2.8052
37 L A -2.0668
38 D A 0.0000
39 P A -2.6103
40 D A -3.6256
41 K A -4.0171
42 D A -3.5738
43 G A -2.8217
44 T A -2.4888
45 L A 0.0000
46 E A -1.9735
47 A A -2.4088
48 K A -2.8477
49 E A -2.0885
50 L A 0.0000
51 K A -3.0391
52 G A -1.9862
53 R A -1.7332
54 V A -1.5850
55 S A -2.2204
56 E A -3.2896
57 A A -2.1946
58 D A -2.6401
59 L A 0.0000
60 K A -4.0027
61 K A -3.4345
62 L A -2.2093
63 D A 0.0000
64 P A -2.5528
65 D A -3.5402
66 N A -3.8224
67 D A -3.6145
68 G A -2.6477
69 T A -2.3682
70 L A 0.0000
71 E A -2.6820
72 K A -2.2655
73 K A -2.4237
74 E A -1.7970
75 Y A 0.0000
76 L A -0.7233
77 A A -0.6967
78 A A 0.0000
79 V A 0.0000
80 E A -1.0591
81 A A -0.8209
82 Q A -0.8729
83 F A 0.0000
84 K A -2.5830
85 A A -1.3754
86 A A 0.0000
87 N A 0.0000
88 P A -2.1247
89 D A -3.2503
90 N A -3.5057
91 D A -3.3627
92 G A -2.4139
93 T A -1.8509
94 I A 0.0000
95 E A -1.3878
96 A A -1.5439
97 R A -2.0998
98 E A 0.0000
99 L A 0.0000
100 A A -1.2474
101 S A -0.5925
102 P A -0.3034
103 A A -0.4698
104 G A 0.0000
105 S A -0.4449
106 A A -0.2918
107 L A 0.0000
108 V A 0.0000
109 N A -1.0536
110 L A 0.0000
111 I A 0.0000
112 R A -2.0388
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Laboratory of Theory of Biopolymers 2018