| Chain sequence(s) |
A: QVQLQESGGGLVQPGGSLRLSCAASNSHFSINTMGWYRQAPGKQRELVAAITSGGSTNYTDSVKGRFTISRDNAKNTVYLQMNSLEPEDTAVYYCNADGWDPLYNSYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:08)
[INFO] Main: Simulation completed successfully. (00:01:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.5108 | |
| 2 | V | A | -1.4280 | |
| 3 | Q | A | -1.9003 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.6721 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -1.0893 | |
| 8 | G | A | -1.0250 | |
| 9 | G | A | -0.7864 | |
| 10 | G | A | -0.0354 | |
| 11 | L | A | 1.0380 | |
| 12 | V | A | 0.0202 | |
| 13 | Q | A | -1.2862 | |
| 14 | P | A | -1.5370 | |
| 15 | G | A | -1.3668 | |
| 16 | G | A | -0.8862 | |
| 17 | S | A | -1.1219 | |
| 18 | L | A | -1.0114 | |
| 19 | R | A | -2.2566 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.8723 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -1.1827 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.5966 | |
| 26 | N | A | -1.6883 | |
| 27 | S | A | -1.4982 | |
| 28 | H | A | -1.2518 | |
| 29 | F | A | -0.6847 | |
| 30 | S | A | -0.7697 | |
| 31 | I | A | 0.0000 | |
| 32 | N | A | -0.9612 | |
| 33 | T | A | -0.7291 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | -0.5603 | |
| 38 | R | A | -1.4333 | |
| 39 | Q | A | -2.0827 | |
| 40 | A | A | -1.9665 | |
| 41 | P | A | -1.2967 | |
| 42 | G | A | -1.8011 | |
| 43 | K | A | -3.1538 | |
| 44 | Q | A | -3.0812 | |
| 45 | R | A | -2.6045 | |
| 46 | E | A | -2.5949 | |
| 47 | L | A | -0.8283 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | A | A | -0.4294 | |
| 51 | I | A | 0.0000 | |
| 52 | T | A | -1.1744 | |
| 53 | S | A | -1.2678 | |
| 54 | G | A | -1.1407 | |
| 55 | G | A | -1.2057 | |
| 56 | S | A | -0.9355 | |
| 57 | T | A | -0.9649 | |
| 58 | N | A | -1.6670 | |
| 59 | Y | A | -1.4288 | |
| 60 | T | A | -1.7866 | |
| 61 | D | A | -2.6258 | |
| 62 | S | A | -1.8405 | |
| 63 | V | A | 0.0000 | |
| 64 | K | A | -2.7876 | |
| 65 | G | A | -1.7583 | |
| 66 | R | A | -1.4847 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | -1.0958 | |
| 69 | I | A | 0.0000 | |
| 70 | S | A | -0.6359 | |
| 71 | R | A | -1.2169 | |
| 72 | D | A | -1.7250 | |
| 73 | N | A | -2.3866 | |
| 74 | A | A | -1.6294 | |
| 75 | K | A | -2.4449 | |
| 76 | N | A | -1.9032 | |
| 77 | T | A | -1.2992 | |
| 78 | V | A | 0.0000 | |
| 79 | Y | A | -0.6248 | |
| 80 | L | A | 0.0000 | |
| 81 | Q | A | -1.5516 | |
| 82 | M | A | 0.0000 | |
| 83 | N | A | -1.4087 | |
| 84 | S | A | -1.2088 | |
| 85 | L | A | 0.0000 | |
| 86 | E | A | -2.3371 | |
| 87 | P | A | -1.8949 | |
| 88 | E | A | -2.3448 | |
| 89 | D | A | 0.0000 | |
| 90 | T | A | -0.9249 | |
| 91 | A | A | 0.0000 | |
| 92 | V | A | -0.4047 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | -0.5604 | |
| 95 | C | A | 0.0000 | |
| 96 | N | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | D | A | -0.8622 | |
| 99 | G | A | -0.1214 | |
| 100 | W | A | 0.7952 | |
| 101 | D | A | 0.3213 | |
| 102 | P | A | 0.5012 | |
| 103 | L | A | 1.6034 | |
| 104 | Y | A | 1.0163 | |
| 105 | N | A | -0.6118 | |
| 106 | S | A | -0.3592 | |
| 107 | Y | A | -0.3783 | |
| 108 | W | A | -0.2408 | |
| 109 | G | A | -0.8366 | |
| 110 | Q | A | -1.4076 | |
| 111 | G | A | -0.9637 | |
| 112 | T | A | -1.0691 | |
| 113 | Q | A | -0.9992 | |
| 114 | V | A | 0.0000 | |
| 115 | T | A | -0.2492 | |
| 116 | V | A | 0.0000 | |
| 117 | S | A | -0.7151 | |
| 118 | S | A | -0.9200 |