Project name: query_structure

Status: done

Started: 2026-03-16 20:08:38
Settings
Chain sequence(s) A: EDKCSPSGAICSGFGPPEQCCSGACVLNRRARSWKCQ
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:19)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:19)
Show buried residues

Minimal score value
-3.3467
Maximal score value
1.7851
Average score
-0.8435
Total score value
-31.2095

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -3.1241
2 D A -3.3467
3 K A -3.2727
4 C A -2.0692
5 S A -0.9134
6 P A -0.6772
7 S A -0.4971
8 G A -0.2199
9 A A 0.5321
10 I A 1.7851
11 C A 0.0000
12 S A 0.9192
13 G A 1.0900
14 F A 1.7295
15 G A 0.0958
16 P A -0.9074
17 P A -1.1649
18 E A -2.4981
19 Q A -1.7131
20 C A 0.0000
21 C A -0.8046
22 S A -0.7591
23 G A -1.1632
24 A A -0.7375
25 C A 0.2101
26 V A 0.4173
27 L A -0.3022
28 N A -1.7084
29 R A -3.2084
30 R A -3.3076
31 A A -2.0116
32 R A -2.9295
33 S A -0.8216
34 W A 0.7481
35 K A 0.3268
36 C A 0.0000
37 Q A -0.9060
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Laboratory of Theory of Biopolymers 2018